Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NCLP19338 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NCLP19338 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC21.04■□□□□ 0.96
NCLP19338 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NCLP19338 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NCLP19338 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC21.04■□□□□ 0.96
NCLP19338 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NCLP19338 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NCLP19338 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NCLP19338 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NCLP19338 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
NCLP19338 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC21.04■□□□□ 0.96
NCLP19338 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NCLP19338 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC21.04■□□□□ 0.96
NCLP19338 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC21.04■□□□□ 0.96
NCLP19338 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
NCLP19338 AC073508.3-201ENST00000619697 1419 ntBASIC21.04■□□□□ 0.96
NCLP19338 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.03■□□□□ 0.96
NCLP19338 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
NCLP19338 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NCLP19338 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC21.03■□□□□ 0.96
NCLP19338 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NCLP19338 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
NCLP19338 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
NCLP19338 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.03■□□□□ 0.96
NCLP19338 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
NCLP19338 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.03■□□□□ 0.96
NCLP19338 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NCLP19338 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NCLP19338 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
NCLP19338 UBALD1-205ENST00000590891 2641 ntBASIC21.03■□□□□ 0.96
NCLP19338 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NCLP19338 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC21.03■□□□□ 0.96
NCLP19338 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NCLP19338 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NCLP19338 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NCLP19338 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NCLP19338 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NCLP19338 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
NCLP19338 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC21.02■□□□□ 0.96
NCLP19338 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NCLP19338 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
NCLP19338 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
NCLP19338 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
NCLP19338 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NCLP19338 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.02■□□□□ 0.96
NCLP19338 AL137013.1-201ENST00000432946 1228 ntBASIC21.02■□□□□ 0.96
NCLP19338 KRT18P23-201ENST00000435622 1283 ntBASIC21.02■□□□□ 0.96
NCLP19338 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.02■□□□□ 0.96
NCLP19338 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NCLP19338 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NCLP19338 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
NCLP19338 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NCLP19338 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
NCLP19338 KRT18P55-202ENST00000578578 1546 ntBASIC21.02■□□□□ 0.96
NCLP19338 AC018695.7-201ENST00000624587 2492 ntBASIC21.02■□□□□ 0.96
NCLP19338 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NCLP19338 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NCLP19338 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
NCLP19338 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
NCLP19338 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
NCLP19338 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
NCLP19338 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NCLP19338 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NCLP19338 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NCLP19338 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NCLP19338 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.01■□□□□ 0.95
NCLP19338 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
NCLP19338 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC21.01■□□□□ 0.95
NCLP19338 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.01■□□□□ 0.95
NCLP19338 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
NCLP19338 CA15P1-201ENST00000481698 905 ntBASIC21.01■□□□□ 0.95
NCLP19338 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
NCLP19338 LINC00602-201ENST00000629776 2065 ntBASIC21.01■□□□□ 0.95
NCLP19338 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC21.01■□□□□ 0.95
NCLP19338 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC21.01■□□□□ 0.95
NCLP19338 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
NCLP19338 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NCLP19338 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NCLP19338 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC21■□□□□ 0.95
NCLP19338 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NCLP19338 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NCLP19338 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
NCLP19338 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NCLP19338 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
NCLP19338 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
NCLP19338 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NCLP19338 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC21■□□□□ 0.95
NCLP19338 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
NCLP19338 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21■□□□□ 0.95
NCLP19338 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21■□□□□ 0.95
NCLP19338 ECEL1P2-202ENST00000465689 757 ntBASIC21■□□□□ 0.95
NCLP19338 AC128688.1-201ENST00000487626 519 ntBASIC21■□□□□ 0.95
NCLP19338 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
NCLP19338 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21■□□□□ 0.95
NCLP19338 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21■□□□□ 0.95
NCLP19338 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
NCLP19338 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
NCLP19338 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
NCLP19338 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms