Protein–RNA interactions for Protein: P09327

VIL1, Villin-1, humanhuman

Known RBP Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1P09327 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VIL1P09327 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC20.93■□□□□ 0.94
VIL1P09327 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VIL1P09327 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.93■□□□□ 0.94
VIL1P09327 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VIL1P09327 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VIL1P09327 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.93■□□□□ 0.94
VIL1P09327 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.93■□□□□ 0.94
VIL1P09327 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VIL1P09327 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VIL1P09327 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.93■□□□□ 0.94
VIL1P09327 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VIL1P09327 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC20.93■□□□□ 0.94
VIL1P09327 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VIL1P09327 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC20.93■□□□□ 0.94
VIL1P09327 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC20.93■□□□□ 0.94
VIL1P09327 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VIL1P09327 AC005498.2-205ENST00000593218 784 ntBASIC20.93■□□□□ 0.94
VIL1P09327 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC20.93■□□□□ 0.94
VIL1P09327 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.93■□□□□ 0.94
VIL1P09327 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VIL1P09327 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.93■□□□□ 0.94
VIL1P09327 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VIL1P09327 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.93■□□□□ 0.94
VIL1P09327 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VIL1P09327 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VIL1P09327 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VIL1P09327 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VIL1P09327 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
VIL1P09327 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VIL1P09327 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VIL1P09327 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
VIL1P09327 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC20.92■□□□□ 0.94
VIL1P09327 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC20.92■□□□□ 0.94
VIL1P09327 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
VIL1P09327 LINC00628-201ENST00000628516 1289 ntBASIC20.92■□□□□ 0.94
VIL1P09327 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
VIL1P09327 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
VIL1P09327 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
VIL1P09327 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
VIL1P09327 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
VIL1P09327 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
VIL1P09327 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VIL1P09327 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC20.91■□□□□ 0.94
VIL1P09327 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VIL1P09327 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
VIL1P09327 AC135776.1-201ENST00000319817 2481 ntBASIC20.91■□□□□ 0.94
VIL1P09327 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC20.91■□□□□ 0.94
VIL1P09327 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC20.91■□□□□ 0.94
VIL1P09327 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
VIL1P09327 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VIL1P09327 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VIL1P09327 HLA-DRB6-201ENST00000411500 1235 ntBASIC20.91■□□□□ 0.94
VIL1P09327 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VIL1P09327 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC20.91■□□□□ 0.94
VIL1P09327 AL513480.1-201ENST00000451731 511 ntBASIC20.91■□□□□ 0.94
VIL1P09327 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VIL1P09327 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VIL1P09327 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VIL1P09327 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.91■□□□□ 0.94
VIL1P09327 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20.91■□□□□ 0.94
VIL1P09327 IGHV3OR16-6-201ENST00000568775 360 ntBASIC20.91■□□□□ 0.94
VIL1P09327 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VIL1P09327 INO80C-206ENST00000586489 594 ntTSL 3 BASIC20.91■□□□□ 0.94
VIL1P09327 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VIL1P09327 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC20.91■□□□□ 0.94
VIL1P09327 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.9■□□□□ 0.94
VIL1P09327 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC20.9■□□□□ 0.94
VIL1P09327 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VIL1P09327 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VIL1P09327 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VIL1P09327 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
VIL1P09327 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VIL1P09327 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VIL1P09327 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
VIL1P09327 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VIL1P09327 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VIL1P09327 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VIL1P09327 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
VIL1P09327 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
VIL1P09327 FALEC-201ENST00000416894 566 ntTSL 3 BASIC20.9■□□□□ 0.94
VIL1P09327 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
VIL1P09327 AC112191.1-201ENST00000523689 701 ntBASIC20.9■□□□□ 0.94
VIL1P09327 AC093520.2-201ENST00000561830 333 ntBASIC20.9■□□□□ 0.94
VIL1P09327 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
VIL1P09327 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.9■□□□□ 0.94
VIL1P09327 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VIL1P09327 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.9■□□□□ 0.94
VIL1P09327 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VIL1P09327 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VIL1P09327 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VIL1P09327 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VIL1P09327 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VIL1P09327 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
VIL1P09327 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
VIL1P09327 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
VIL1P09327 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC20.89■□□□□ 0.94
VIL1P09327 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
VIL1P09327 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VIL1P09327 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms