Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL4A2P08572 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL4A2P08572 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL4A2P08572 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL4A2P08572 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.58■□□□□ 0.41
COL4A2P08572 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
COL4A2P08572 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.58■□□□□ 0.41
COL4A2P08572 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
COL4A2P08572 AC093214.1-201ENST00000511688 1107 ntBASIC17.58■□□□□ 0.41
COL4A2P08572 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL4A2P08572 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
COL4A2P08572 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.58■□□□□ 0.41
COL4A2P08572 REXO1L3P-201ENST00000622202 1288 ntBASIC17.58■□□□□ 0.41
COL4A2P08572 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.58■□□□□ 0.41
COL4A2P08572 AL020996.1-203ENST00000536896 2307 ntBASIC17.58■□□□□ 0.41
COL4A2P08572 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL4A2P08572 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
COL4A2P08572 AP000974.1-201ENST00000623909 2387 ntBASIC17.58■□□□□ 0.41
COL4A2P08572 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
COL4A2P08572 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL4A2P08572 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL4A2P08572 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL4A2P08572 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL4A2P08572 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL4A2P08572 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL4A2P08572 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL4A2P08572 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COL4A2P08572 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.58■□□□□ 0.4
COL4A2P08572 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.58■□□□□ 0.4
COL4A2P08572 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COL4A2P08572 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.58■□□□□ 0.4
COL4A2P08572 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL4A2P08572 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL4A2P08572 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL4A2P08572 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
COL4A2P08572 MIR661-201ENST00000384842 89 ntBASIC17.58■□□□□ 0.4
COL4A2P08572 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.58■□□□□ 0.4
COL4A2P08572 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.58■□□□□ 0.4
COL4A2P08572 FAM86GP-201ENST00000448322 971 ntBASIC17.58■□□□□ 0.4
COL4A2P08572 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.58■□□□□ 0.4
COL4A2P08572 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
COL4A2P08572 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.58■□□□□ 0.4
COL4A2P08572 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.58■□□□□ 0.4
COL4A2P08572 AC004449.1-201ENST00000564240 433 ntBASIC17.58■□□□□ 0.4
COL4A2P08572 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
COL4A2P08572 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL4A2P08572 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.58■□□□□ 0.4
COL4A2P08572 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL4A2P08572 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.58■□□□□ 0.4
COL4A2P08572 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
COL4A2P08572 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.57■□□□□ 0.4
COL4A2P08572 AC129492.6-201ENST00000611383 1305 ntBASIC17.57■□□□□ 0.4
COL4A2P08572 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL4A2P08572 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.57■□□□□ 0.4
COL4A2P08572 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.57■□□□□ 0.4
COL4A2P08572 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.57■□□□□ 0.4
COL4A2P08572 AC046185.3-201ENST00000623228 1824 ntBASIC17.57■□□□□ 0.4
COL4A2P08572 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL4A2P08572 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL4A2P08572 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL4A2P08572 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL4A2P08572 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL4A2P08572 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
COL4A2P08572 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL4A2P08572 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
COL4A2P08572 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.57■□□□□ 0.4
COL4A2P08572 AC026120.1-201ENST00000611536 926 ntBASIC17.57■□□□□ 0.4
COL4A2P08572 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.57■□□□□ 0.4
COL4A2P08572 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.57■□□□□ 0.4
COL4A2P08572 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL4A2P08572 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
COL4A2P08572 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.57■□□□□ 0.4
COL4A2P08572 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
COL4A2P08572 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.57■□□□□ 0.4
COL4A2P08572 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.57■□□□□ 0.4
COL4A2P08572 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL4A2P08572 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL4A2P08572 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.57■□□□□ 0.4
COL4A2P08572 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL4A2P08572 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.57■□□□□ 0.4
COL4A2P08572 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL4A2P08572 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
COL4A2P08572 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COL4A2P08572 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COL4A2P08572 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COL4A2P08572 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
COL4A2P08572 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL4A2P08572 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL4A2P08572 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.56■□□□□ 0.4
COL4A2P08572 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.56■□□□□ 0.4
COL4A2P08572 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
COL4A2P08572 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COL4A2P08572 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COL4A2P08572 AC067863.1-201ENST00000494933 530 ntBASIC17.56■□□□□ 0.4
COL4A2P08572 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.56■□□□□ 0.4
COL4A2P08572 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.56■□□□□ 0.4
COL4A2P08572 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.56■□□□□ 0.4
COL4A2P08572 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL4A2P08572 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL4A2P08572 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms