Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TPM3P06753 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TPM3P06753 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
TPM3P06753 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TPM3P06753 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TPM3P06753 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
TPM3P06753 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TPM3P06753 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TPM3P06753 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.81■□□□□ 0.76
TPM3P06753 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TPM3P06753 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TPM3P06753 CRYGFP-201ENST00000418459 633 ntBASIC19.81■□□□□ 0.76
TPM3P06753 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TPM3P06753 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.81■□□□□ 0.76
TPM3P06753 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.81■□□□□ 0.76
TPM3P06753 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TPM3P06753 AC112497.1-201ENST00000624824 639 ntBASIC19.81■□□□□ 0.76
TPM3P06753 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TPM3P06753 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
TPM3P06753 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TPM3P06753 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.81■□□□□ 0.76
TPM3P06753 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC19.81■□□□□ 0.76
TPM3P06753 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
TPM3P06753 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.81■□□□□ 0.76
TPM3P06753 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TPM3P06753 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TPM3P06753 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.81■□□□□ 0.76
TPM3P06753 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TPM3P06753 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TPM3P06753 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TPM3P06753 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TPM3P06753 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TPM3P06753 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TPM3P06753 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TPM3P06753 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TPM3P06753 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TPM3P06753 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TPM3P06753 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TPM3P06753 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.8■□□□□ 0.76
TPM3P06753 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.8■□□□□ 0.76
TPM3P06753 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.8■□□□□ 0.76
TPM3P06753 AC104390.1-201ENST00000555663 520 ntBASIC19.8■□□□□ 0.76
TPM3P06753 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
TPM3P06753 AC116407.2-201ENST00000613639 860 ntBASIC19.8■□□□□ 0.76
TPM3P06753 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TPM3P06753 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TPM3P06753 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TPM3P06753 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TPM3P06753 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.8■□□□□ 0.76
TPM3P06753 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC19.8■□□□□ 0.76
TPM3P06753 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TPM3P06753 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
TPM3P06753 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TPM3P06753 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
TPM3P06753 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TPM3P06753 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
TPM3P06753 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TPM3P06753 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TPM3P06753 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TPM3P06753 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.79■□□□□ 0.76
TPM3P06753 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TPM3P06753 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TPM3P06753 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TPM3P06753 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TPM3P06753 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TPM3P06753 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TPM3P06753 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TPM3P06753 ID1-201ENST00000376105 1233 ntBASIC19.79■□□□□ 0.76
TPM3P06753 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TPM3P06753 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.79■□□□□ 0.76
TPM3P06753 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.79■□□□□ 0.76
TPM3P06753 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.79■□□□□ 0.76
TPM3P06753 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.79■□□□□ 0.76
TPM3P06753 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.79■□□□□ 0.76
TPM3P06753 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.79■□□□□ 0.76
TPM3P06753 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.79■□□□□ 0.76
TPM3P06753 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.79■□□□□ 0.76
TPM3P06753 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TPM3P06753 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TPM3P06753 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TPM3P06753 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.79■□□□□ 0.76
TPM3P06753 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
TPM3P06753 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TPM3P06753 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TPM3P06753 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TPM3P06753 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
TPM3P06753 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TPM3P06753 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TPM3P06753 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TPM3P06753 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.78■□□□□ 0.76
TPM3P06753 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
TPM3P06753 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TPM3P06753 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
TPM3P06753 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.78■□□□□ 0.76
TPM3P06753 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TPM3P06753 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TPM3P06753 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TPM3P06753 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TPM3P06753 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.78■□□□□ 0.76
TPM3P06753 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms