Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.89■□□□□ 0.45
HLA-DQB2P05538 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
HLA-DQB2P05538 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DQB2P05538 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.89■□□□□ 0.45
HLA-DQB2P05538 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DQB2P05538 AC141586.5-201ENST00000624546 2050 ntBASIC17.89■□□□□ 0.45
HLA-DQB2P05538 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DQB2P05538 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DQB2P05538 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.88■□□□□ 0.45
HLA-DQB2P05538 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DQB2P05538 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DQB2P05538 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DQB2P05538 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DQB2P05538 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.88■□□□□ 0.45
HLA-DQB2P05538 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DQB2P05538 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DQB2P05538 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.88■□□□□ 0.45
HLA-DQB2P05538 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
HLA-DQB2P05538 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DQB2P05538 NUS1P2-201ENST00000417358 873 ntBASIC17.88■□□□□ 0.45
HLA-DQB2P05538 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.88■□□□□ 0.45
HLA-DQB2P05538 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DQB2P05538 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.88■□□□□ 0.45
HLA-DQB2P05538 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.88■□□□□ 0.45
HLA-DQB2P05538 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
HLA-DQB2P05538 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DQB2P05538 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
HLA-DQB2P05538 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.88■□□□□ 0.45
HLA-DQB2P05538 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.88■□□□□ 0.45
HLA-DQB2P05538 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DQB2P05538 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.87■□□□□ 0.45
HLA-DQB2P05538 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DQB2P05538 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DQB2P05538 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
HLA-DQB2P05538 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DQB2P05538 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
HLA-DQB2P05538 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.87■□□□□ 0.45
HLA-DQB2P05538 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
HLA-DQB2P05538 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.87■□□□□ 0.45
HLA-DQB2P05538 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.87■□□□□ 0.45
HLA-DQB2P05538 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.87■□□□□ 0.45
HLA-DQB2P05538 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
HLA-DQB2P05538 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
HLA-DQB2P05538 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DQB2P05538 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DQB2P05538 KRT8P10-201ENST00000450021 1447 ntBASIC17.87■□□□□ 0.45
HLA-DQB2P05538 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
HLA-DQB2P05538 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DQB2P05538 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DQB2P05538 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
HLA-DQB2P05538 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
HLA-DQB2P05538 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.87■□□□□ 0.45
HLA-DQB2P05538 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.87■□□□□ 0.45
HLA-DQB2P05538 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DQB2P05538 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DQB2P05538 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DQB2P05538 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.87■□□□□ 0.45
HLA-DQB2P05538 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.87■□□□□ 0.45
HLA-DQB2P05538 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.86■□□□□ 0.45
HLA-DQB2P05538 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DQB2P05538 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DQB2P05538 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.86■□□□□ 0.45
HLA-DQB2P05538 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DQB2P05538 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.86■□□□□ 0.45
HLA-DQB2P05538 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DQB2P05538 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DQB2P05538 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DQB2P05538 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.86■□□□□ 0.45
HLA-DQB2P05538 POM121L3P-201ENST00000419331 1163 ntBASIC17.86■□□□□ 0.45
HLA-DQB2P05538 AC103564.2-201ENST00000432853 1299 ntBASIC17.86■□□□□ 0.45
HLA-DQB2P05538 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.86■□□□□ 0.45
HLA-DQB2P05538 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DQB2P05538 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.86■□□□□ 0.45
HLA-DQB2P05538 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.86■□□□□ 0.45
HLA-DQB2P05538 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.86■□□□□ 0.45
HLA-DQB2P05538 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DQB2P05538 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DQB2P05538 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DQB2P05538 AL139327.4-201ENST00000612362 153 ntBASIC17.86■□□□□ 0.45
HLA-DQB2P05538 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.86■□□□□ 0.45
HLA-DQB2P05538 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DQB2P05538 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
HLA-DQB2P05538 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DQB2P05538 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DQB2P05538 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DQB2P05538 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DQB2P05538 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DQB2P05538 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DQB2P05538 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DQB2P05538 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DQB2P05538 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
HLA-DQB2P05538 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.86■□□□□ 0.45
HLA-DQB2P05538 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DQB2P05538 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.86■□□□□ 0.45
HLA-DQB2P05538 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DQB2P05538 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DQB2P05538 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DQB2P05538 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.86■□□□□ 0.45
HLA-DQB2P05538 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
HLA-DQB2P05538 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms