Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL2A1P02458 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC20.43■□□□□ 0.86
COL2A1P02458 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL2A1P02458 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL2A1P02458 ADH5P3-201ENST00000433842 1137 ntBASIC20.43■□□□□ 0.86
COL2A1P02458 SLC25A6P5-201ENST00000435663 894 ntBASIC20.43■□□□□ 0.86
COL2A1P02458 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC20.43■□□□□ 0.86
COL2A1P02458 ACTG1P14-201ENST00000446382 1122 ntBASIC20.43■□□□□ 0.86
COL2A1P02458 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL2A1P02458 SLC25A6P2-201ENST00000497974 877 ntBASIC20.43■□□□□ 0.86
COL2A1P02458 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC20.43■□□□□ 0.86
COL2A1P02458 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.43■□□□□ 0.86
COL2A1P02458 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC20.43■□□□□ 0.86
COL2A1P02458 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC20.43■□□□□ 0.86
COL2A1P02458 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.43■□□□□ 0.86
COL2A1P02458 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL2A1P02458 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
COL2A1P02458 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.43■□□□□ 0.86
COL2A1P02458 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL2A1P02458 CYP51A1P2-201ENST00000419457 1499 ntBASIC20.43■□□□□ 0.86
COL2A1P02458 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL2A1P02458 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.43■□□□□ 0.86
COL2A1P02458 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
COL2A1P02458 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL2A1P02458 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
COL2A1P02458 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL2A1P02458 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL2A1P02458 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL2A1P02458 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
COL2A1P02458 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL2A1P02458 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL2A1P02458 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC20.43■□□□□ 0.86
COL2A1P02458 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL2A1P02458 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC20.43■□□□□ 0.86
COL2A1P02458 AP000344.2-201ENST00000512987 629 ntBASIC20.43■□□□□ 0.86
COL2A1P02458 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.43■□□□□ 0.86
COL2A1P02458 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.42■□□□□ 0.86
COL2A1P02458 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL2A1P02458 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.42■□□□□ 0.86
COL2A1P02458 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COL2A1P02458 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
COL2A1P02458 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL2A1P02458 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL2A1P02458 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL2A1P02458 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COL2A1P02458 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
COL2A1P02458 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COL2A1P02458 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL2A1P02458 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL2A1P02458 AC027612.4-201ENST00000605371 583 ntBASIC20.42■□□□□ 0.86
COL2A1P02458 AC091812.2-201ENST00000619081 385 ntBASIC20.42■□□□□ 0.86
COL2A1P02458 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL2A1P02458 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
COL2A1P02458 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL2A1P02458 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
COL2A1P02458 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL2A1P02458 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL2A1P02458 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.42■□□□□ 0.86
COL2A1P02458 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL2A1P02458 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL2A1P02458 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL2A1P02458 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL2A1P02458 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.41■□□□□ 0.86
COL2A1P02458 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL2A1P02458 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL2A1P02458 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.41■□□□□ 0.86
COL2A1P02458 AC025580.3-201ENST00000617932 1424 ntBASIC20.41■□□□□ 0.86
COL2A1P02458 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.41■□□□□ 0.86
COL2A1P02458 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL2A1P02458 STOM-202ENST00000347359 870 ntTSL 2 BASIC20.41■□□□□ 0.86
COL2A1P02458 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL2A1P02458 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC20.41■□□□□ 0.86
COL2A1P02458 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL2A1P02458 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL2A1P02458 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL2A1P02458 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC20.41■□□□□ 0.86
COL2A1P02458 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC20.41■□□□□ 0.86
COL2A1P02458 AC074386.1-202ENST00000463561 864 ntBASIC20.41■□□□□ 0.86
COL2A1P02458 AC107918.2-201ENST00000530817 355 ntBASIC20.41■□□□□ 0.86
COL2A1P02458 AL031432.2-201ENST00000566714 459 ntBASIC20.41■□□□□ 0.86
COL2A1P02458 AL928711.1-201ENST00000570165 459 ntBASIC20.41■□□□□ 0.86
COL2A1P02458 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC20.41■□□□□ 0.86
COL2A1P02458 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.41■□□□□ 0.86
COL2A1P02458 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL2A1P02458 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
COL2A1P02458 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL2A1P02458 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL2A1P02458 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL2A1P02458 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.41■□□□□ 0.86
COL2A1P02458 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL2A1P02458 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL2A1P02458 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL2A1P02458 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL2A1P02458 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL2A1P02458 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL2A1P02458 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.4■□□□□ 0.86
COL2A1P02458 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.4■□□□□ 0.86
COL2A1P02458 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
COL2A1P02458 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COL2A1P02458 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms