Protein–RNA interactions for Protein: P00374

DHFR, Dihydrofolate reductase, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHFRP00374 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DHFRP00374 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.31■□□□□ 0.04
DHFRP00374 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
DHFRP00374 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DHFRP00374 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DHFRP00374 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
DHFRP00374 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
DHFRP00374 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DHFRP00374 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DHFRP00374 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DHFRP00374 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
DHFRP00374 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DHFRP00374 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DHFRP00374 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DHFRP00374 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DHFRP00374 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC15.31■□□□□ 0.04
DHFRP00374 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC15.31■□□□□ 0.04
DHFRP00374 GAS7-202ENST00000396115 929 ntTSL 5 BASIC15.31■□□□□ 0.04
DHFRP00374 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DHFRP00374 AP003097.1-201ENST00000530657 1135 ntBASIC15.31■□□□□ 0.04
DHFRP00374 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC15.31■□□□□ 0.04
DHFRP00374 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC15.31■□□□□ 0.04
DHFRP00374 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DHFRP00374 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DHFRP00374 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC15.31■□□□□ 0.04
DHFRP00374 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.31■□□□□ 0.04
DHFRP00374 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.31■□□□□ 0.04
DHFRP00374 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DHFRP00374 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
DHFRP00374 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.31■□□□□ 0.04
DHFRP00374 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.31■□□□□ 0.04
DHFRP00374 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.31■□□□□ 0.04
DHFRP00374 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.31■□□□□ 0.04
DHFRP00374 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DHFRP00374 AC022188.1-201ENST00000620960 1664 ntBASIC15.31■□□□□ 0.04
DHFRP00374 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.31■□□□□ 0.04
DHFRP00374 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DHFRP00374 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC15.31■□□□□ 0.04
DHFRP00374 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
DHFRP00374 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DHFRP00374 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DHFRP00374 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DHFRP00374 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
DHFRP00374 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DHFRP00374 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DHFRP00374 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
DHFRP00374 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DHFRP00374 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DHFRP00374 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DHFRP00374 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
DHFRP00374 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
DHFRP00374 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DHFRP00374 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DHFRP00374 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DHFRP00374 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DHFRP00374 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DHFRP00374 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
DHFRP00374 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DHFRP00374 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
DHFRP00374 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DHFRP00374 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.3■□□□□ 0.04
DHFRP00374 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DHFRP00374 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
DHFRP00374 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
DHFRP00374 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DHFRP00374 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DHFRP00374 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
DHFRP00374 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
DHFRP00374 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DHFRP00374 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
DHFRP00374 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DHFRP00374 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.3■□□□□ 0.04
DHFRP00374 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
DHFRP00374 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC15.3■□□□□ 0.04
DHFRP00374 EMC9-206ENST00000560403 872 ntTSL 2 BASIC15.3■□□□□ 0.04
DHFRP00374 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
DHFRP00374 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DHFRP00374 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC15.3■□□□□ 0.04
DHFRP00374 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC15.3■□□□□ 0.04
DHFRP00374 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DHFRP00374 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC15.3■□□□□ 0.04
DHFRP00374 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DHFRP00374 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC15.3■□□□□ 0.04
DHFRP00374 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
DHFRP00374 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
DHFRP00374 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
DHFRP00374 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DHFRP00374 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
DHFRP00374 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DHFRP00374 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DHFRP00374 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
DHFRP00374 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DHFRP00374 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DHFRP00374 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.29■□□□□ 0.04
DHFRP00374 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.29■□□□□ 0.04
DHFRP00374 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
DHFRP00374 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DHFRP00374 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
DHFRP00374 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.29■□□□□ 0.04
DHFRP00374 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms