Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
MBD3O95983 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MBD3O95983 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MBD3O95983 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MBD3O95983 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC20.24■□□□□ 0.83
MBD3O95983 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MBD3O95983 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MBD3O95983 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
MBD3O95983 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MBD3O95983 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MBD3O95983 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MBD3O95983 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.24■□□□□ 0.83
MBD3O95983 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
MBD3O95983 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.24■□□□□ 0.83
MBD3O95983 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.24■□□□□ 0.83
MBD3O95983 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.24■□□□□ 0.83
MBD3O95983 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MBD3O95983 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.24■□□□□ 0.83
MBD3O95983 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.24■□□□□ 0.83
MBD3O95983 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
MBD3O95983 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
MBD3O95983 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MBD3O95983 AC046185.3-201ENST00000623228 1824 ntBASIC20.24■□□□□ 0.83
MBD3O95983 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
MBD3O95983 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
MBD3O95983 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MBD3O95983 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
MBD3O95983 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC20.24■□□□□ 0.83
MBD3O95983 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MBD3O95983 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MBD3O95983 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MBD3O95983 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MBD3O95983 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC20.23■□□□□ 0.83
MBD3O95983 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
MBD3O95983 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MBD3O95983 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
MBD3O95983 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MBD3O95983 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
MBD3O95983 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MBD3O95983 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MBD3O95983 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.23■□□□□ 0.83
MBD3O95983 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
MBD3O95983 AC128676.1-201ENST00000454392 318 ntBASIC20.23■□□□□ 0.83
MBD3O95983 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC20.23■□□□□ 0.83
MBD3O95983 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.23■□□□□ 0.83
MBD3O95983 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.23■□□□□ 0.83
MBD3O95983 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.23■□□□□ 0.83
MBD3O95983 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
MBD3O95983 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.23■□□□□ 0.83
MBD3O95983 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.23■□□□□ 0.83
MBD3O95983 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC20.23■□□□□ 0.83
MBD3O95983 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.23■□□□□ 0.83
MBD3O95983 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.23■□□□□ 0.83
MBD3O95983 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
MBD3O95983 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
MBD3O95983 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MBD3O95983 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MBD3O95983 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MBD3O95983 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MBD3O95983 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MBD3O95983 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MBD3O95983 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MBD3O95983 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MBD3O95983 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MBD3O95983 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.22■□□□□ 0.83
MBD3O95983 BX276092.7-203ENST00000637198 1536 ntBASIC20.22■□□□□ 0.83
MBD3O95983 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
MBD3O95983 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MBD3O95983 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC20.22■□□□□ 0.83
MBD3O95983 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.22■□□□□ 0.83
MBD3O95983 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MBD3O95983 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
MBD3O95983 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MBD3O95983 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC20.22■□□□□ 0.83
MBD3O95983 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC20.22■□□□□ 0.83
MBD3O95983 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.22■□□□□ 0.83
MBD3O95983 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MBD3O95983 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MBD3O95983 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
MBD3O95983 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MBD3O95983 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MBD3O95983 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.22■□□□□ 0.83
MBD3O95983 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
MBD3O95983 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC20.22■□□□□ 0.83
MBD3O95983 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MBD3O95983 KRT18P65-201ENST00000439811 1286 ntBASIC20.22■□□□□ 0.83
MBD3O95983 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.22■□□□□ 0.83
MBD3O95983 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MBD3O95983 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.22■□□□□ 0.83
MBD3O95983 AC113404.2-201ENST00000507884 177 ntBASIC20.22■□□□□ 0.83
MBD3O95983 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MBD3O95983 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MBD3O95983 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MBD3O95983 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
MBD3O95983 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.22■□□□□ 0.83
MBD3O95983 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
MBD3O95983 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
MBD3O95983 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MBD3O95983 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MBD3O95983 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms