Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MBD4O95243 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC21.03■□□□□ 0.96
MBD4O95243 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
MBD4O95243 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MBD4O95243 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
MBD4O95243 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC21.03■□□□□ 0.96
MBD4O95243 COX5A-202ENST00000562233 441 ntTSL 3 BASIC21.03■□□□□ 0.96
MBD4O95243 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC21.03■□□□□ 0.96
MBD4O95243 AP001005.1-201ENST00000571755 1248 ntBASIC21.03■□□□□ 0.96
MBD4O95243 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.03■□□□□ 0.96
MBD4O95243 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MBD4O95243 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MBD4O95243 MIR7706-201ENST00000613747 67 ntBASIC21.03■□□□□ 0.96
MBD4O95243 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
MBD4O95243 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MBD4O95243 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MBD4O95243 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
MBD4O95243 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MBD4O95243 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MBD4O95243 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
MBD4O95243 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
MBD4O95243 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MBD4O95243 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
MBD4O95243 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
MBD4O95243 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
MBD4O95243 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MBD4O95243 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MBD4O95243 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
MBD4O95243 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MBD4O95243 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
MBD4O95243 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
MBD4O95243 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MBD4O95243 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
MBD4O95243 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC21.02■□□□□ 0.96
MBD4O95243 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC21.02■□□□□ 0.96
MBD4O95243 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
MBD4O95243 AC003669.1-201ENST00000334569 611 ntBASIC21.02■□□□□ 0.96
MBD4O95243 RAB17-203ENST00000409576 466 ntTSL 3 BASIC21.02■□□□□ 0.96
MBD4O95243 PENK-208ENST00000523051 772 ntTSL 5 BASIC21.02■□□□□ 0.96
MBD4O95243 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC21.02■□□□□ 0.96
MBD4O95243 RNF151-202ENST00000569210 853 ntTSL 2 BASIC21.02■□□□□ 0.96
MBD4O95243 FAM215A-202ENST00000632077 792 ntBASIC21.02■□□□□ 0.96
MBD4O95243 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
MBD4O95243 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
MBD4O95243 LINC00304-203ENST00000565008 1864 ntBASIC21.02■□□□□ 0.96
MBD4O95243 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MBD4O95243 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC21.02■□□□□ 0.96
MBD4O95243 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC21.02■□□□□ 0.95
MBD4O95243 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
MBD4O95243 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
MBD4O95243 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC21.01■□□□□ 0.95
MBD4O95243 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MBD4O95243 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MBD4O95243 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
MBD4O95243 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MBD4O95243 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MBD4O95243 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MBD4O95243 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MBD4O95243 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC21.01■□□□□ 0.95
MBD4O95243 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC21.01■□□□□ 0.95
MBD4O95243 AL020989.1-201ENST00000422979 469 ntBASIC21.01■□□□□ 0.95
MBD4O95243 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
MBD4O95243 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC21.01■□□□□ 0.95
MBD4O95243 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC21.01■□□□□ 0.95
MBD4O95243 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC21.01■□□□□ 0.95
MBD4O95243 AL022326.1-202ENST00000641533 845 ntBASIC21.01■□□□□ 0.95
MBD4O95243 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MBD4O95243 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MBD4O95243 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MBD4O95243 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MBD4O95243 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC21.01■□□□□ 0.95
MBD4O95243 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MBD4O95243 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
MBD4O95243 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MBD4O95243 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC21■□□□□ 0.95
MBD4O95243 AL355312.1-201ENST00000407115 2176 ntBASIC21■□□□□ 0.95
MBD4O95243 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
MBD4O95243 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
MBD4O95243 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC21■□□□□ 0.95
MBD4O95243 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC21■□□□□ 0.95
MBD4O95243 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
MBD4O95243 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC21■□□□□ 0.95
MBD4O95243 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
MBD4O95243 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
MBD4O95243 CYB561-217ENST00000582997 877 ntTSL 5 BASIC21■□□□□ 0.95
MBD4O95243 COPE-211ENST00000600932 1144 ntTSL 5 BASIC21■□□□□ 0.95
MBD4O95243 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC21■□□□□ 0.95
MBD4O95243 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
MBD4O95243 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC21■□□□□ 0.95
MBD4O95243 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC21■□□□□ 0.95
MBD4O95243 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
MBD4O95243 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC21■□□□□ 0.95
MBD4O95243 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MBD4O95243 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC21■□□□□ 0.95
MBD4O95243 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC21■□□□□ 0.95
MBD4O95243 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MBD4O95243 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MBD4O95243 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
MBD4O95243 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
MBD4O95243 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms