Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SCAF4O95104 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
SCAF4O95104 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SCAF4O95104 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
SCAF4O95104 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SCAF4O95104 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.5□□□□□ -0.09
SCAF4O95104 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SCAF4O95104 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
SCAF4O95104 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SCAF4O95104 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SCAF4O95104 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
SCAF4O95104 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SCAF4O95104 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.5□□□□□ -0.09
SCAF4O95104 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SCAF4O95104 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SCAF4O95104 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SCAF4O95104 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SCAF4O95104 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC14.5□□□□□ -0.09
SCAF4O95104 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
SCAF4O95104 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SCAF4O95104 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SCAF4O95104 REXO1L10P-201ENST00000615707 1290 ntBASIC14.5□□□□□ -0.09
SCAF4O95104 AC011298.2-201ENST00000617989 482 ntBASIC14.5□□□□□ -0.09
SCAF4O95104 REXO1L12P-201ENST00000622156 912 ntBASIC14.5□□□□□ -0.09
SCAF4O95104 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
SCAF4O95104 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
SCAF4O95104 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SCAF4O95104 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SCAF4O95104 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.5□□□□□ -0.09
SCAF4O95104 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SCAF4O95104 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SCAF4O95104 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SCAF4O95104 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
SCAF4O95104 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SCAF4O95104 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SCAF4O95104 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SCAF4O95104 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.5□□□□□ -0.09
SCAF4O95104 FSCN1P1-201ENST00000568912 1481 ntBASIC14.5□□□□□ -0.09
SCAF4O95104 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14.5□□□□□ -0.09
SCAF4O95104 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
SCAF4O95104 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
SCAF4O95104 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
SCAF4O95104 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
SCAF4O95104 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SCAF4O95104 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SCAF4O95104 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SCAF4O95104 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SCAF4O95104 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SCAF4O95104 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SCAF4O95104 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SCAF4O95104 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
SCAF4O95104 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SCAF4O95104 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SCAF4O95104 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SCAF4O95104 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SCAF4O95104 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SCAF4O95104 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC14.49□□□□□ -0.09
SCAF4O95104 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC14.49□□□□□ -0.09
SCAF4O95104 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
SCAF4O95104 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SCAF4O95104 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.49□□□□□ -0.09
SCAF4O95104 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.49□□□□□ -0.09
SCAF4O95104 AC063926.3-201ENST00000624734 5658 ntBASIC14.49□□□□□ -0.09
SCAF4O95104 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SCAF4O95104 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.49□□□□□ -0.09
SCAF4O95104 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SCAF4O95104 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SCAF4O95104 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC14.49□□□□□ -0.09
SCAF4O95104 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC14.49□□□□□ -0.09
SCAF4O95104 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC14.49□□□□□ -0.09
SCAF4O95104 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC14.49□□□□□ -0.09
SCAF4O95104 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC14.49□□□□□ -0.09
SCAF4O95104 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC14.49□□□□□ -0.09
SCAF4O95104 AL355075.4-201ENST00000554988 638 ntBASIC14.49□□□□□ -0.09
SCAF4O95104 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC14.49□□□□□ -0.09
SCAF4O95104 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC14.49□□□□□ -0.09
SCAF4O95104 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC14.49□□□□□ -0.09
SCAF4O95104 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SCAF4O95104 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SCAF4O95104 AL163051.1-201ENST00000569214 1512 ntBASIC14.49□□□□□ -0.09
SCAF4O95104 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SCAF4O95104 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
SCAF4O95104 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
SCAF4O95104 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.49□□□□□ -0.09
SCAF4O95104 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SCAF4O95104 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
SCAF4O95104 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
SCAF4O95104 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SCAF4O95104 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.49□□□□□ -0.09
SCAF4O95104 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.49□□□□□ -0.09
SCAF4O95104 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
SCAF4O95104 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.49□□□□□ -0.09
SCAF4O95104 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
SCAF4O95104 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SCAF4O95104 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SCAF4O95104 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
SCAF4O95104 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SCAF4O95104 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SCAF4O95104 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SCAF4O95104 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms