Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.28■□□□□ 0.2
NKX2-2O95096 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.28■□□□□ 0.2
NKX2-2O95096 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX2-2O95096 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.28■□□□□ 0.2
NKX2-2O95096 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.28■□□□□ 0.2
NKX2-2O95096 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.28■□□□□ 0.2
NKX2-2O95096 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
NKX2-2O95096 AC093458.2-201ENST00000623150 629 ntBASIC16.28■□□□□ 0.2
NKX2-2O95096 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
NKX2-2O95096 CROCCP2-202ENST00000412962 2773 ntBASIC16.28■□□□□ 0.2
NKX2-2O95096 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NKX2-2O95096 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX2-2O95096 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
NKX2-2O95096 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.28■□□□□ 0.2
NKX2-2O95096 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX2-2O95096 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NKX2-2O95096 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX2-2O95096 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX2-2O95096 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX2-2O95096 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX2-2O95096 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NKX2-2O95096 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.28■□□□□ 0.2
NKX2-2O95096 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.28■□□□□ 0.2
NKX2-2O95096 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.28■□□□□ 0.2
NKX2-2O95096 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.28■□□□□ 0.2
NKX2-2O95096 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX2-2O95096 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
NKX2-2O95096 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NKX2-2O95096 INTS4P1-201ENST00000438455 1935 ntBASIC16.27■□□□□ 0.2
NKX2-2O95096 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NKX2-2O95096 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
NKX2-2O95096 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NKX2-2O95096 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NKX2-2O95096 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NKX2-2O95096 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
NKX2-2O95096 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NKX2-2O95096 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
NKX2-2O95096 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NKX2-2O95096 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.27■□□□□ 0.2
NKX2-2O95096 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NKX2-2O95096 POM121L3P-201ENST00000419331 1163 ntBASIC16.27■□□□□ 0.2
NKX2-2O95096 UPK3BP1-201ENST00000428678 509 ntBASIC16.27■□□□□ 0.2
NKX2-2O95096 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.27■□□□□ 0.2
NKX2-2O95096 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.27■□□□□ 0.2
NKX2-2O95096 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NKX2-2O95096 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.27■□□□□ 0.2
NKX2-2O95096 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.27■□□□□ 0.2
NKX2-2O95096 AC111152.3-201ENST00000569699 673 ntBASIC16.27■□□□□ 0.2
NKX2-2O95096 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.27■□□□□ 0.2
NKX2-2O95096 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
NKX2-2O95096 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.27■□□□□ 0.2
NKX2-2O95096 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
NKX2-2O95096 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
NKX2-2O95096 AL353593.2-201ENST00000602529 1483 ntBASIC16.27■□□□□ 0.19
NKX2-2O95096 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NKX2-2O95096 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.27■□□□□ 0.19
NKX2-2O95096 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
NKX2-2O95096 KRT8P10-201ENST00000450021 1447 ntBASIC16.27■□□□□ 0.19
NKX2-2O95096 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NKX2-2O95096 AC016396.2-201ENST00000562575 1417 ntBASIC16.27■□□□□ 0.19
NKX2-2O95096 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.26■□□□□ 0.19
NKX2-2O95096 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
NKX2-2O95096 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.26■□□□□ 0.19
NKX2-2O95096 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NKX2-2O95096 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.26■□□□□ 0.19
NKX2-2O95096 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NKX2-2O95096 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NKX2-2O95096 AC138932.1-201ENST00000534164 6830 ntBASIC16.26■□□□□ 0.19
NKX2-2O95096 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NKX2-2O95096 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NKX2-2O95096 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
NKX2-2O95096 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NKX2-2O95096 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.26■□□□□ 0.19
NKX2-2O95096 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NKX2-2O95096 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.26■□□□□ 0.19
NKX2-2O95096 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.26■□□□□ 0.19
NKX2-2O95096 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.26■□□□□ 0.19
NKX2-2O95096 AC096582.2-201ENST00000510860 516 ntBASIC16.26■□□□□ 0.19
NKX2-2O95096 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
NKX2-2O95096 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NKX2-2O95096 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
NKX2-2O95096 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NKX2-2O95096 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
NKX2-2O95096 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.26■□□□□ 0.19
NKX2-2O95096 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.26■□□□□ 0.19
NKX2-2O95096 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NKX2-2O95096 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.26■□□□□ 0.19
NKX2-2O95096 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.26■□□□□ 0.19
NKX2-2O95096 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NKX2-2O95096 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NKX2-2O95096 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NKX2-2O95096 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NKX2-2O95096 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
NKX2-2O95096 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
NKX2-2O95096 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NKX2-2O95096 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.26■□□□□ 0.19
NKX2-2O95096 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
NKX2-2O95096 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
NKX2-2O95096 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.25■□□□□ 0.19
NKX2-2O95096 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms