Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC7.78□□□□□ -1.16
USH2AO75445 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC7.78□□□□□ -1.16
USH2AO75445 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
USH2AO75445 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
USH2AO75445 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
USH2AO75445 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC7.78□□□□□ -1.16
USH2AO75445 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
USH2AO75445 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
USH2AO75445 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC7.78□□□□□ -1.16
USH2AO75445 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
USH2AO75445 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
USH2AO75445 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC7.78□□□□□ -1.16
USH2AO75445 ZNF767P-206ENST00000513792 565 ntBASIC7.78□□□□□ -1.16
USH2AO75445 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
USH2AO75445 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
USH2AO75445 TBC1D3P5-201ENST00000579401 1545 ntBASIC7.78□□□□□ -1.16
USH2AO75445 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC7.78□□□□□ -1.16
USH2AO75445 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
USH2AO75445 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC7.78□□□□□ -1.16
USH2AO75445 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
USH2AO75445 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
USH2AO75445 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
USH2AO75445 TCF3P1-201ENST00000423021 1937 ntBASIC7.78□□□□□ -1.16
USH2AO75445 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
USH2AO75445 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
USH2AO75445 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
USH2AO75445 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
USH2AO75445 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
USH2AO75445 AL512638.1-201ENST00000457493 794 ntBASIC7.78□□□□□ -1.16
USH2AO75445 FUZ-207ENST00000526575 482 ntTSL 4 BASIC7.78□□□□□ -1.16
USH2AO75445 AC109635.5-201ENST00000533593 962 ntBASIC7.78□□□□□ -1.16
USH2AO75445 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
USH2AO75445 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
USH2AO75445 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
USH2AO75445 AC100803.2-201ENST00000562459 1963 ntBASIC7.78□□□□□ -1.16
USH2AO75445 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
USH2AO75445 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC7.78□□□□□ -1.16
USH2AO75445 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
USH2AO75445 AC012676.1-201ENST00000574705 1949 ntBASIC7.78□□□□□ -1.16
USH2AO75445 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC7.78□□□□□ -1.16
USH2AO75445 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC7.78□□□□□ -1.16
USH2AO75445 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC7.78□□□□□ -1.16
USH2AO75445 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC7.78□□□□□ -1.16
USH2AO75445 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
USH2AO75445 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
USH2AO75445 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
USH2AO75445 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC7.78□□□□□ -1.16
USH2AO75445 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
USH2AO75445 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
USH2AO75445 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC7.78□□□□□ -1.16
USH2AO75445 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
USH2AO75445 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.16
USH2AO75445 KRT8P19-201ENST00000551916 1455 ntBASIC7.77□□□□□ -1.16
USH2AO75445 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.16
USH2AO75445 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC7.77□□□□□ -1.16
USH2AO75445 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC7.77□□□□□ -1.16
USH2AO75445 AC092978.1-202ENST00000637590 1327 ntBASIC7.77□□□□□ -1.16
USH2AO75445 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
USH2AO75445 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
USH2AO75445 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC7.77□□□□□ -1.16
USH2AO75445 AC104794.3-201ENST00000566840 1248 ntBASIC7.77□□□□□ -1.16
USH2AO75445 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
USH2AO75445 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC7.77□□□□□ -1.16
USH2AO75445 COQ4-205ENST00000609948 956 ntTSL 2 BASIC7.77□□□□□ -1.16
USH2AO75445 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
USH2AO75445 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
USH2AO75445 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC7.77□□□□□ -1.16
USH2AO75445 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
USH2AO75445 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC7.77□□□□□ -1.17
USH2AO75445 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
USH2AO75445 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC7.77□□□□□ -1.17
USH2AO75445 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
USH2AO75445 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
USH2AO75445 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC7.77□□□□□ -1.17
USH2AO75445 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC7.77□□□□□ -1.17
USH2AO75445 COG4-212ENST00000564653 590 ntTSL 5 BASIC7.77□□□□□ -1.17
USH2AO75445 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
USH2AO75445 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
USH2AO75445 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
USH2AO75445 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
USH2AO75445 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC7.77□□□□□ -1.17
USH2AO75445 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
USH2AO75445 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
USH2AO75445 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC7.77□□□□□ -1.17
USH2AO75445 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC7.77□□□□□ -1.17
USH2AO75445 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC7.77□□□□□ -1.17
USH2AO75445 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC7.77□□□□□ -1.17
USH2AO75445 AC092506.1-202ENST00000401022 528 ntBASIC7.77□□□□□ -1.17
USH2AO75445 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC7.77□□□□□ -1.17
USH2AO75445 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC7.77□□□□□ -1.17
USH2AO75445 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC7.77□□□□□ -1.17
USH2AO75445 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC7.77□□□□□ -1.17
USH2AO75445 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC7.77□□□□□ -1.17
USH2AO75445 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC7.77□□□□□ -1.17
USH2AO75445 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
USH2AO75445 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
USH2AO75445 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
USH2AO75445 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
USH2AO75445 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
USH2AO75445 AC018445.3-201ENST00000624177 1945 ntBASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms