Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.95■□□□□ 0.3
CPNE3O75131 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.95■□□□□ 0.3
CPNE3O75131 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE3O75131 FGFR3P6-201ENST00000457012 610 ntBASIC16.95■□□□□ 0.3
CPNE3O75131 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.95■□□□□ 0.3
CPNE3O75131 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.95■□□□□ 0.3
CPNE3O75131 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.95■□□□□ 0.3
CPNE3O75131 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.95■□□□□ 0.3
CPNE3O75131 AP001269.4-201ENST00000609611 512 ntBASIC16.95■□□□□ 0.3
CPNE3O75131 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.95■□□□□ 0.3
CPNE3O75131 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.95■□□□□ 0.3
CPNE3O75131 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE3O75131 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE3O75131 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE3O75131 AC073592.3-201ENST00000625118 1834 ntBASIC16.95■□□□□ 0.3
CPNE3O75131 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE3O75131 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE3O75131 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.95■□□□□ 0.3
CPNE3O75131 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.95■□□□□ 0.3
CPNE3O75131 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE3O75131 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE3O75131 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE3O75131 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.95■□□□□ 0.3
CPNE3O75131 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.95■□□□□ 0.3
CPNE3O75131 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE3O75131 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE3O75131 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.94■□□□□ 0.3
CPNE3O75131 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE3O75131 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CPNE3O75131 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.94■□□□□ 0.3
CPNE3O75131 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE3O75131 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CPNE3O75131 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CPNE3O75131 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE3O75131 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CPNE3O75131 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.94■□□□□ 0.3
CPNE3O75131 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE3O75131 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CPNE3O75131 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE3O75131 AL031284.1-201ENST00000419297 478 ntBASIC16.94■□□□□ 0.3
CPNE3O75131 AL590627.1-203ENST00000421194 1026 ntBASIC16.94■□□□□ 0.3
CPNE3O75131 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.94■□□□□ 0.3
CPNE3O75131 AC093909.1-201ENST00000504731 1122 ntBASIC16.94■□□□□ 0.3
CPNE3O75131 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE3O75131 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE3O75131 BX640515.1-201ENST00000617215 977 ntBASIC16.94■□□□□ 0.3
CPNE3O75131 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CPNE3O75131 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE3O75131 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE3O75131 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.94■□□□□ 0.3
CPNE3O75131 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CPNE3O75131 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.94■□□□□ 0.3
CPNE3O75131 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.94■□□□□ 0.3
CPNE3O75131 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE3O75131 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CPNE3O75131 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
CPNE3O75131 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE3O75131 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE3O75131 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE3O75131 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
CPNE3O75131 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.93■□□□□ 0.3
CPNE3O75131 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE3O75131 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE3O75131 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.93■□□□□ 0.3
CPNE3O75131 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE3O75131 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE3O75131 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CPNE3O75131 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE3O75131 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE3O75131 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.93■□□□□ 0.3
CPNE3O75131 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE3O75131 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
CPNE3O75131 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.93■□□□□ 0.3
CPNE3O75131 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.93■□□□□ 0.3
CPNE3O75131 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CPNE3O75131 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.93■□□□□ 0.3
CPNE3O75131 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.93■□□□□ 0.3
CPNE3O75131 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.93■□□□□ 0.3
CPNE3O75131 PRORSD1P-202ENST00000563365 2154 ntBASIC16.93■□□□□ 0.3
CPNE3O75131 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
CPNE3O75131 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.93■□□□□ 0.3
CPNE3O75131 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.93■□□□□ 0.3
CPNE3O75131 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE3O75131 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CPNE3O75131 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE3O75131 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CPNE3O75131 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE3O75131 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.93■□□□□ 0.3
CPNE3O75131 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.93■□□□□ 0.3
CPNE3O75131 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE3O75131 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.93■□□□□ 0.3
CPNE3O75131 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE3O75131 AL139384.1-201ENST00000612143 3047 ntBASIC16.93■□□□□ 0.3
CPNE3O75131 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.93■□□□□ 0.3
CPNE3O75131 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CPNE3O75131 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CPNE3O75131 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.93■□□□□ 0.3
CPNE3O75131 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE3O75131 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.93■□□□□ 0.3
CPNE3O75131 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms