Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14□□□□□ -0.17
CUBNO60494 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CUBNO60494 MIR943-201ENST00000401286 94 ntBASIC14□□□□□ -0.17
CUBNO60494 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CUBNO60494 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
CUBNO60494 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC14□□□□□ -0.17
CUBNO60494 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CUBNO60494 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CUBNO60494 ANO7L1-203ENST00000602586 1720 ntBASIC14□□□□□ -0.17
CUBNO60494 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14□□□□□ -0.17
CUBNO60494 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CUBNO60494 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14□□□□□ -0.17
CUBNO60494 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CUBNO60494 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14□□□□□ -0.17
CUBNO60494 LINC02560-201ENST00000596379 459 ntBASIC14□□□□□ -0.17
CUBNO60494 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CUBNO60494 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14□□□□□ -0.17
CUBNO60494 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CUBNO60494 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC14□□□□□ -0.17
CUBNO60494 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC14□□□□□ -0.17
CUBNO60494 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14□□□□□ -0.17
CUBNO60494 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC14□□□□□ -0.17
CUBNO60494 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
CUBNO60494 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC14□□□□□ -0.17
CUBNO60494 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC14□□□□□ -0.17
CUBNO60494 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CUBNO60494 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CUBNO60494 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CUBNO60494 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CUBNO60494 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CUBNO60494 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CUBNO60494 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14□□□□□ -0.17
CUBNO60494 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CUBNO60494 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14□□□□□ -0.17
CUBNO60494 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14□□□□□ -0.17
CUBNO60494 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CUBNO60494 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CUBNO60494 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CUBNO60494 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CUBNO60494 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CUBNO60494 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.99□□□□□ -0.17
CUBNO60494 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.99□□□□□ -0.17
CUBNO60494 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
CUBNO60494 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC13.99□□□□□ -0.17
CUBNO60494 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.99□□□□□ -0.17
CUBNO60494 TIMM8BP1-201ENST00000452384 211 ntBASIC13.99□□□□□ -0.17
CUBNO60494 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CUBNO60494 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CUBNO60494 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.99□□□□□ -0.17
CUBNO60494 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CUBNO60494 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CUBNO60494 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CUBNO60494 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CUBNO60494 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
CUBNO60494 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.99□□□□□ -0.17
CUBNO60494 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CUBNO60494 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CUBNO60494 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.99□□□□□ -0.17
CUBNO60494 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC13.99□□□□□ -0.17
CUBNO60494 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CUBNO60494 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC13.99□□□□□ -0.17
CUBNO60494 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.99□□□□□ -0.17
CUBNO60494 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CUBNO60494 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC13.99□□□□□ -0.17
CUBNO60494 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CUBNO60494 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CUBNO60494 AC009949.1-201ENST00000623048 1830 ntBASIC13.99□□□□□ -0.17
CUBNO60494 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CUBNO60494 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC13.99□□□□□ -0.17
CUBNO60494 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CUBNO60494 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
CUBNO60494 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CUBNO60494 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CUBNO60494 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC13.98□□□□□ -0.17
CUBNO60494 AC023141.13-201ENST00000604991 943 ntBASIC13.98□□□□□ -0.17
CUBNO60494 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.98□□□□□ -0.17
CUBNO60494 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC13.98□□□□□ -0.17
CUBNO60494 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CUBNO60494 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CUBNO60494 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC13.98□□□□□ -0.17
CUBNO60494 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CUBNO60494 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CUBNO60494 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.98□□□□□ -0.17
CUBNO60494 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CUBNO60494 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.98□□□□□ -0.17
CUBNO60494 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CUBNO60494 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CUBNO60494 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CUBNO60494 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CUBNO60494 KLF4P1-201ENST00000412782 1185 ntBASIC13.98□□□□□ -0.17
CUBNO60494 KLF2P3-201ENST00000451977 1087 ntBASIC13.98□□□□□ -0.17
CUBNO60494 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CUBNO60494 AC069335.1-201ENST00000489972 472 ntBASIC13.98□□□□□ -0.17
CUBNO60494 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CUBNO60494 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CUBNO60494 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CUBNO60494 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CUBNO60494 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CUBNO60494 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CUBNO60494 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms