Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LDB2O43679 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
LDB2O43679 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LDB2O43679 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
LDB2O43679 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LDB2O43679 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
LDB2O43679 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LDB2O43679 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LDB2O43679 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LDB2O43679 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LDB2O43679 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LDB2O43679 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
LDB2O43679 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LDB2O43679 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LDB2O43679 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
LDB2O43679 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
LDB2O43679 TP73-AS1-210ENST00000637775 1455 ntBASIC17.63■□□□□ 0.41
LDB2O43679 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LDB2O43679 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.63■□□□□ 0.41
LDB2O43679 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
LDB2O43679 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LDB2O43679 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LDB2O43679 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LDB2O43679 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.63■□□□□ 0.41
LDB2O43679 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LDB2O43679 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
LDB2O43679 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LDB2O43679 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LDB2O43679 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
LDB2O43679 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LDB2O43679 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LDB2O43679 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.63■□□□□ 0.41
LDB2O43679 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.63■□□□□ 0.41
LDB2O43679 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LDB2O43679 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.63■□□□□ 0.41
LDB2O43679 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LDB2O43679 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LDB2O43679 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.63■□□□□ 0.41
LDB2O43679 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.63■□□□□ 0.41
LDB2O43679 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.63■□□□□ 0.41
LDB2O43679 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
LDB2O43679 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LDB2O43679 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.63■□□□□ 0.41
LDB2O43679 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LDB2O43679 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LDB2O43679 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LDB2O43679 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
LDB2O43679 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LDB2O43679 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.63■□□□□ 0.41
LDB2O43679 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LDB2O43679 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LDB2O43679 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LDB2O43679 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
LDB2O43679 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
LDB2O43679 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.62■□□□□ 0.41
LDB2O43679 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LDB2O43679 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LDB2O43679 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.62■□□□□ 0.41
LDB2O43679 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
LDB2O43679 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
LDB2O43679 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LDB2O43679 AC103564.2-201ENST00000432853 1299 ntBASIC17.62■□□□□ 0.41
LDB2O43679 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
LDB2O43679 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LDB2O43679 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.62■□□□□ 0.41
LDB2O43679 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.62■□□□□ 0.41
LDB2O43679 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.62■□□□□ 0.41
LDB2O43679 AP000867.3-201ENST00000524675 377 ntBASIC17.62■□□□□ 0.41
LDB2O43679 AC074051.2-201ENST00000565115 352 ntBASIC17.62■□□□□ 0.41
LDB2O43679 AC109462.3-201ENST00000573934 613 ntBASIC17.62■□□□□ 0.41
LDB2O43679 AC092329.2-201ENST00000598402 547 ntBASIC17.62■□□□□ 0.41
LDB2O43679 AL139327.4-201ENST00000612362 153 ntBASIC17.62■□□□□ 0.41
LDB2O43679 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
LDB2O43679 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
LDB2O43679 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LDB2O43679 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LDB2O43679 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.62■□□□□ 0.41
LDB2O43679 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LDB2O43679 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LDB2O43679 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LDB2O43679 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LDB2O43679 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
LDB2O43679 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LDB2O43679 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.61■□□□□ 0.41
LDB2O43679 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
LDB2O43679 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LDB2O43679 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
LDB2O43679 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
LDB2O43679 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
LDB2O43679 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LDB2O43679 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LDB2O43679 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
LDB2O43679 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LDB2O43679 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LDB2O43679 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LDB2O43679 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
LDB2O43679 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
LDB2O43679 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
LDB2O43679 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.61■□□□□ 0.41
LDB2O43679 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms