Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 Z83836.1-201ENST00000624605 1642 ntBASIC15.66■□□□□ 0.1
SGCEO43556 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SGCEO43556 GUK1-204ENST00000366721 689 ntTSL 3 BASIC15.66■□□□□ 0.1
SGCEO43556 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.66■□□□□ 0.1
SGCEO43556 SPDYE13P-201ENST00000445314 798 ntBASIC15.66■□□□□ 0.1
SGCEO43556 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.66■□□□□ 0.1
SGCEO43556 AL390719.2-201ENST00000606993 987 ntBASIC15.66■□□□□ 0.1
SGCEO43556 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.66■□□□□ 0.1
SGCEO43556 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.66■□□□□ 0.1
SGCEO43556 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SGCEO43556 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.66■□□□□ 0.1
SGCEO43556 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SGCEO43556 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SGCEO43556 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.66■□□□□ 0.1
SGCEO43556 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SGCEO43556 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SGCEO43556 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SGCEO43556 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SGCEO43556 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SGCEO43556 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SGCEO43556 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SGCEO43556 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SGCEO43556 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SGCEO43556 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SGCEO43556 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SGCEO43556 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SGCEO43556 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SGCEO43556 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SGCEO43556 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.65■□□□□ 0.1
SGCEO43556 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.65■□□□□ 0.1
SGCEO43556 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.65■□□□□ 0.1
SGCEO43556 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SGCEO43556 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SGCEO43556 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC15.65■□□□□ 0.1
SGCEO43556 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SGCEO43556 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SGCEO43556 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SGCEO43556 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SGCEO43556 RNF126P1-202ENST00000569893 925 ntBASIC15.65■□□□□ 0.1
SGCEO43556 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.65■□□□□ 0.1
SGCEO43556 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SGCEO43556 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SGCEO43556 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.65■□□□□ 0.1
SGCEO43556 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SGCEO43556 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SGCEO43556 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SGCEO43556 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SGCEO43556 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SGCEO43556 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SGCEO43556 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SGCEO43556 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
SGCEO43556 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SGCEO43556 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SGCEO43556 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SGCEO43556 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SGCEO43556 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.64■□□□□ 0.09
SGCEO43556 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SGCEO43556 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.64■□□□□ 0.09
SGCEO43556 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SGCEO43556 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SGCEO43556 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SGCEO43556 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SGCEO43556 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.64■□□□□ 0.09
SGCEO43556 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SGCEO43556 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.64■□□□□ 0.09
SGCEO43556 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.64■□□□□ 0.09
SGCEO43556 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.64■□□□□ 0.09
SGCEO43556 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SGCEO43556 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SGCEO43556 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SGCEO43556 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SGCEO43556 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SGCEO43556 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SGCEO43556 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
SGCEO43556 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SGCEO43556 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SGCEO43556 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SGCEO43556 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SGCEO43556 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SGCEO43556 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SGCEO43556 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SGCEO43556 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SGCEO43556 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
SGCEO43556 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SGCEO43556 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
SGCEO43556 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.63■□□□□ 0.09
SGCEO43556 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
SGCEO43556 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SGCEO43556 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SGCEO43556 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SGCEO43556 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SGCEO43556 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SGCEO43556 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SGCEO43556 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SGCEO43556 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.63■□□□□ 0.09
SGCEO43556 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SGCEO43556 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SGCEO43556 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SGCEO43556 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SGCEO43556 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms