Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.79■□□□□ 0.6
HOXA2O43364 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
HOXA2O43364 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HOXA2O43364 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXA2O43364 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HOXA2O43364 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXA2O43364 AL020996.1-203ENST00000536896 2307 ntBASIC18.79■□□□□ 0.6
HOXA2O43364 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXA2O43364 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.79■□□□□ 0.6
HOXA2O43364 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.79■□□□□ 0.6
HOXA2O43364 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXA2O43364 FLJ13224-201ENST00000313737 1514 ntBASIC18.79■□□□□ 0.6
HOXA2O43364 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.78■□□□□ 0.6
HOXA2O43364 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HOXA2O43364 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXA2O43364 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.78■□□□□ 0.6
HOXA2O43364 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.78■□□□□ 0.6
HOXA2O43364 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXA2O43364 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
HOXA2O43364 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXA2O43364 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.78■□□□□ 0.6
HOXA2O43364 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXA2O43364 IGLL3P-201ENST00000412472 434 ntBASIC18.78■□□□□ 0.6
HOXA2O43364 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
HOXA2O43364 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.78■□□□□ 0.6
HOXA2O43364 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
HOXA2O43364 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.78■□□□□ 0.6
HOXA2O43364 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.78■□□□□ 0.6
HOXA2O43364 PDPK2P-202ENST00000562415 1191 ntBASIC18.78■□□□□ 0.6
HOXA2O43364 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.78■□□□□ 0.6
HOXA2O43364 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.78■□□□□ 0.6
HOXA2O43364 AL596442.2-201ENST00000610240 980 ntBASIC18.78■□□□□ 0.6
HOXA2O43364 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.78■□□□□ 0.6
HOXA2O43364 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HOXA2O43364 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
HOXA2O43364 AL513190.1-201ENST00000621254 727 ntBASIC18.78■□□□□ 0.6
HOXA2O43364 AC007064.4-201ENST00000637740 555 ntBASIC18.78■□□□□ 0.6
HOXA2O43364 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
HOXA2O43364 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HOXA2O43364 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.78■□□□□ 0.6
HOXA2O43364 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
HOXA2O43364 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
HOXA2O43364 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.78■□□□□ 0.6
HOXA2O43364 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.78■□□□□ 0.6
HOXA2O43364 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.78■□□□□ 0.6
HOXA2O43364 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXA2O43364 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.78■□□□□ 0.6
HOXA2O43364 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
HOXA2O43364 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXA2O43364 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXA2O43364 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.77■□□□□ 0.6
HOXA2O43364 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.77■□□□□ 0.6
HOXA2O43364 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXA2O43364 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXA2O43364 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXA2O43364 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HOXA2O43364 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
HOXA2O43364 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.77■□□□□ 0.6
HOXA2O43364 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
HOXA2O43364 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.77■□□□□ 0.6
HOXA2O43364 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.77■□□□□ 0.6
HOXA2O43364 AC010507.1-201ENST00000633895 436 ntBASIC18.77■□□□□ 0.6
HOXA2O43364 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXA2O43364 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.77■□□□□ 0.6
HOXA2O43364 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXA2O43364 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.77■□□□□ 0.6
HOXA2O43364 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXA2O43364 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.77■□□□□ 0.6
HOXA2O43364 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HOXA2O43364 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
HOXA2O43364 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
HOXA2O43364 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
HOXA2O43364 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
HOXA2O43364 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.77■□□□□ 0.59
HOXA2O43364 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HOXA2O43364 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.76■□□□□ 0.59
HOXA2O43364 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.76■□□□□ 0.59
HOXA2O43364 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HOXA2O43364 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HOXA2O43364 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.76■□□□□ 0.59
HOXA2O43364 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HOXA2O43364 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HOXA2O43364 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
HOXA2O43364 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HOXA2O43364 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.76■□□□□ 0.59
HOXA2O43364 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.76■□□□□ 0.59
HOXA2O43364 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.76■□□□□ 0.59
HOXA2O43364 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.76■□□□□ 0.59
HOXA2O43364 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HOXA2O43364 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.76■□□□□ 0.59
HOXA2O43364 RHOQP3-201ENST00000437982 621 ntBASIC18.76■□□□□ 0.59
HOXA2O43364 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
HOXA2O43364 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.76■□□□□ 0.59
HOXA2O43364 AC027796.2-201ENST00000575326 344 ntBASIC18.76■□□□□ 0.59
HOXA2O43364 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.76■□□□□ 0.59
HOXA2O43364 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.76■□□□□ 0.59
HOXA2O43364 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.76■□□□□ 0.59
HOXA2O43364 AL355385.1-201ENST00000606123 409 ntBASIC18.76■□□□□ 0.59
HOXA2O43364 AC004877.2-201ENST00000623941 599 ntBASIC18.76■□□□□ 0.59
HOXA2O43364 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms