Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RRP8O43159 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.54■□□□□ 0.24
RRP8O43159 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RRP8O43159 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.54■□□□□ 0.24
RRP8O43159 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RRP8O43159 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RRP8O43159 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RRP8O43159 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
RRP8O43159 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
RRP8O43159 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RRP8O43159 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.54■□□□□ 0.24
RRP8O43159 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RRP8O43159 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RRP8O43159 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RRP8O43159 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RRP8O43159 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RRP8O43159 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.53■□□□□ 0.24
RRP8O43159 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
RRP8O43159 LINC01126-201ENST00000623515 1646 ntBASIC16.53■□□□□ 0.24
RRP8O43159 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RRP8O43159 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RRP8O43159 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
RRP8O43159 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.53■□□□□ 0.24
RRP8O43159 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RRP8O43159 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RRP8O43159 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RRP8O43159 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RRP8O43159 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.53■□□□□ 0.24
RRP8O43159 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RRP8O43159 AC096633.1-201ENST00000422446 749 ntBASIC16.53■□□□□ 0.24
RRP8O43159 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.53■□□□□ 0.24
RRP8O43159 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.53■□□□□ 0.24
RRP8O43159 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.53■□□□□ 0.24
RRP8O43159 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RRP8O43159 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.53■□□□□ 0.24
RRP8O43159 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.53■□□□□ 0.24
RRP8O43159 AC005498.2-205ENST00000593218 784 ntBASIC16.53■□□□□ 0.24
RRP8O43159 AC023141.13-201ENST00000604991 943 ntBASIC16.53■□□□□ 0.24
RRP8O43159 AC091812.2-201ENST00000619081 385 ntBASIC16.53■□□□□ 0.24
RRP8O43159 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
RRP8O43159 AC010507.1-201ENST00000633895 436 ntBASIC16.53■□□□□ 0.24
RRP8O43159 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
RRP8O43159 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
RRP8O43159 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RRP8O43159 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RRP8O43159 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
RRP8O43159 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.53■□□□□ 0.24
RRP8O43159 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RRP8O43159 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
RRP8O43159 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.53■□□□□ 0.24
RRP8O43159 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RRP8O43159 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RRP8O43159 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
RRP8O43159 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
RRP8O43159 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.52■□□□□ 0.24
RRP8O43159 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.52■□□□□ 0.24
RRP8O43159 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RRP8O43159 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RRP8O43159 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RRP8O43159 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RRP8O43159 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.52■□□□□ 0.24
RRP8O43159 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.52■□□□□ 0.24
RRP8O43159 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.52■□□□□ 0.24
RRP8O43159 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
RRP8O43159 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.52■□□□□ 0.24
RRP8O43159 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RRP8O43159 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RRP8O43159 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RRP8O43159 INGX-202ENST00000489074 768 ntBASIC16.52■□□□□ 0.24
RRP8O43159 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
RRP8O43159 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
RRP8O43159 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
RRP8O43159 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.52■□□□□ 0.24
RRP8O43159 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RRP8O43159 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.52■□□□□ 0.24
RRP8O43159 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
RRP8O43159 GGTLC5P-201ENST00000617623 998 ntBASIC16.52■□□□□ 0.24
RRP8O43159 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.52■□□□□ 0.24
RRP8O43159 Z92544.3-201ENST00000624747 417 ntBASIC16.52■□□□□ 0.24
RRP8O43159 LINC00628-201ENST00000628516 1289 ntBASIC16.52■□□□□ 0.24
RRP8O43159 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RRP8O43159 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RRP8O43159 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RRP8O43159 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RRP8O43159 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RRP8O43159 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.52■□□□□ 0.24
RRP8O43159 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RRP8O43159 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.23
RRP8O43159 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.52■□□□□ 0.23
RRP8O43159 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RRP8O43159 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RRP8O43159 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
RRP8O43159 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RRP8O43159 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RRP8O43159 AC025580.3-201ENST00000617932 1424 ntBASIC16.52■□□□□ 0.23
RRP8O43159 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RRP8O43159 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RRP8O43159 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
RRP8O43159 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RRP8O43159 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms