Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SMAD9O15198 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMAD9O15198 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.05■□□□□ 0.16
SMAD9O15198 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.05■□□□□ 0.16
SMAD9O15198 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.05■□□□□ 0.16
SMAD9O15198 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMAD9O15198 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.05■□□□□ 0.16
SMAD9O15198 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SMAD9O15198 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SMAD9O15198 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.05■□□□□ 0.16
SMAD9O15198 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMAD9O15198 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SMAD9O15198 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SMAD9O15198 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SMAD9O15198 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.05■□□□□ 0.16
SMAD9O15198 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.05■□□□□ 0.16
SMAD9O15198 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMAD9O15198 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SMAD9O15198 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMAD9O15198 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMAD9O15198 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMAD9O15198 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
SMAD9O15198 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.04■□□□□ 0.16
SMAD9O15198 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SMAD9O15198 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMAD9O15198 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMAD9O15198 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.04■□□□□ 0.16
SMAD9O15198 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.04■□□□□ 0.16
SMAD9O15198 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.04■□□□□ 0.16
SMAD9O15198 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMAD9O15198 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
SMAD9O15198 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMAD9O15198 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMAD9O15198 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.04■□□□□ 0.16
SMAD9O15198 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.04■□□□□ 0.16
SMAD9O15198 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.04■□□□□ 0.16
SMAD9O15198 AC112698.1-201ENST00000510299 916 ntBASIC16.04■□□□□ 0.16
SMAD9O15198 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.04■□□□□ 0.16
SMAD9O15198 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.04■□□□□ 0.16
SMAD9O15198 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.04■□□□□ 0.16
SMAD9O15198 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.04■□□□□ 0.16
SMAD9O15198 AL353801.3-201ENST00000609898 542 ntBASIC16.04■□□□□ 0.16
SMAD9O15198 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
SMAD9O15198 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.04■□□□□ 0.16
SMAD9O15198 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SMAD9O15198 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SMAD9O15198 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SMAD9O15198 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMAD9O15198 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMAD9O15198 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.04■□□□□ 0.16
SMAD9O15198 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMAD9O15198 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SMAD9O15198 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SMAD9O15198 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMAD9O15198 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMAD9O15198 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.04■□□□□ 0.16
SMAD9O15198 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SMAD9O15198 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SMAD9O15198 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMAD9O15198 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMAD9O15198 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMAD9O15198 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SMAD9O15198 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SMAD9O15198 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SMAD9O15198 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
SMAD9O15198 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.03■□□□□ 0.16
SMAD9O15198 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SMAD9O15198 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SMAD9O15198 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SMAD9O15198 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SMAD9O15198 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SMAD9O15198 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.03■□□□□ 0.16
SMAD9O15198 AC022898.2-201ENST00000616822 1312 ntBASIC16.03■□□□□ 0.16
SMAD9O15198 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
SMAD9O15198 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SMAD9O15198 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SMAD9O15198 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SMAD9O15198 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SMAD9O15198 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SMAD9O15198 HCG4P8-203ENST00000443049 980 ntBASIC16.03■□□□□ 0.16
SMAD9O15198 LINC00265-3P-201ENST00000447588 903 ntBASIC16.03■□□□□ 0.16
SMAD9O15198 TOB2P1-201ENST00000469761 992 ntBASIC16.03■□□□□ 0.16
SMAD9O15198 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SMAD9O15198 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.03■□□□□ 0.16
SMAD9O15198 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SMAD9O15198 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.03■□□□□ 0.16
SMAD9O15198 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.03■□□□□ 0.16
SMAD9O15198 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.03■□□□□ 0.16
SMAD9O15198 AC092329.2-201ENST00000598402 547 ntBASIC16.03■□□□□ 0.16
SMAD9O15198 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SMAD9O15198 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SMAD9O15198 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SMAD9O15198 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.03■□□□□ 0.16
SMAD9O15198 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SMAD9O15198 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SMAD9O15198 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SMAD9O15198 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.03■□□□□ 0.16
SMAD9O15198 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SMAD9O15198 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SMAD9O15198 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms