Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.37■□□□□ 0.53
TRANK1O15050 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.37■□□□□ 0.53
TRANK1O15050 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TRANK1O15050 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.37■□□□□ 0.53
TRANK1O15050 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.37■□□□□ 0.53
TRANK1O15050 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRANK1O15050 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRANK1O15050 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.36■□□□□ 0.53
TRANK1O15050 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.36■□□□□ 0.53
TRANK1O15050 FAM86C2P-203ENST00000528684 1004 ntBASIC18.36■□□□□ 0.53
TRANK1O15050 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
TRANK1O15050 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRANK1O15050 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRANK1O15050 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.36■□□□□ 0.53
TRANK1O15050 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRANK1O15050 COX5BP8-201ENST00000416911 349 ntBASIC18.36■□□□□ 0.53
TRANK1O15050 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.36■□□□□ 0.53
TRANK1O15050 AC079140.1-201ENST00000508039 487 ntBASIC18.36■□□□□ 0.53
TRANK1O15050 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.36■□□□□ 0.53
TRANK1O15050 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.36■□□□□ 0.53
TRANK1O15050 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRANK1O15050 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.36■□□□□ 0.53
TRANK1O15050 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.36■□□□□ 0.53
TRANK1O15050 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TRANK1O15050 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRANK1O15050 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.36■□□□□ 0.53
TRANK1O15050 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.36■□□□□ 0.53
TRANK1O15050 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRANK1O15050 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRANK1O15050 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.36■□□□□ 0.53
TRANK1O15050 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRANK1O15050 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRANK1O15050 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
TRANK1O15050 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.36■□□□□ 0.53
TRANK1O15050 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRANK1O15050 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRANK1O15050 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRANK1O15050 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRANK1O15050 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRANK1O15050 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRANK1O15050 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRANK1O15050 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRANK1O15050 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.35■□□□□ 0.53
TRANK1O15050 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.35■□□□□ 0.53
TRANK1O15050 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRANK1O15050 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRANK1O15050 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRANK1O15050 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
TRANK1O15050 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRANK1O15050 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.35■□□□□ 0.53
TRANK1O15050 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.35■□□□□ 0.53
TRANK1O15050 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TRANK1O15050 AC109462.3-201ENST00000573934 613 ntBASIC18.35■□□□□ 0.53
TRANK1O15050 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TRANK1O15050 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRANK1O15050 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRANK1O15050 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRANK1O15050 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRANK1O15050 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.34■□□□□ 0.53
TRANK1O15050 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.34■□□□□ 0.53
TRANK1O15050 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRANK1O15050 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRANK1O15050 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TRANK1O15050 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
TRANK1O15050 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC18.34■□□□□ 0.53
TRANK1O15050 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TRANK1O15050 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRANK1O15050 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.34■□□□□ 0.53
TRANK1O15050 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.34■□□□□ 0.53
TRANK1O15050 IGHV3-72-202ENST00000621503 303 ntBASIC18.34■□□□□ 0.53
TRANK1O15050 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.34■□□□□ 0.53
TRANK1O15050 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRANK1O15050 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.34■□□□□ 0.53
TRANK1O15050 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
TRANK1O15050 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRANK1O15050 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRANK1O15050 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRANK1O15050 AL096828.2-201ENST00000567259 1965 ntBASIC18.34■□□□□ 0.53
TRANK1O15050 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.34■□□□□ 0.53
TRANK1O15050 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRANK1O15050 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRANK1O15050 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
TRANK1O15050 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRANK1O15050 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.34■□□□□ 0.53
TRANK1O15050 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRANK1O15050 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.34■□□□□ 0.53
TRANK1O15050 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.34■□□□□ 0.53
TRANK1O15050 AL606495.2-201ENST00000605867 535 ntBASIC18.34■□□□□ 0.53
TRANK1O15050 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRANK1O15050 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.34■□□□□ 0.53
TRANK1O15050 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRANK1O15050 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRANK1O15050 AC116562.4-201ENST00000641316 2276 ntBASIC18.33■□□□□ 0.53
TRANK1O15050 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRANK1O15050 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.33■□□□□ 0.53
TRANK1O15050 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.33■□□□□ 0.53
TRANK1O15050 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRANK1O15050 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.33■□□□□ 0.53
TRANK1O15050 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRANK1O15050 AC107918.2-201ENST00000530817 355 ntBASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms