Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 AC233702.3-201ENST00000578656 1387 ntBASIC17.64■□□□□ 0.41
CFAP99D6REC4 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CFAP99D6REC4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CFAP99D6REC4 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CFAP99D6REC4 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CFAP99D6REC4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CFAP99D6REC4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.63■□□□□ 0.41
CFAP99D6REC4 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CFAP99D6REC4 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CFAP99D6REC4 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
CFAP99D6REC4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CFAP99D6REC4 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CFAP99D6REC4 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.63■□□□□ 0.41
CFAP99D6REC4 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.63■□□□□ 0.41
CFAP99D6REC4 SERPINA7P1-201ENST00000443077 631 ntBASIC17.63■□□□□ 0.41
CFAP99D6REC4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.63■□□□□ 0.41
CFAP99D6REC4 AC092119.3-201ENST00000612618 583 ntBASIC17.63■□□□□ 0.41
CFAP99D6REC4 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CFAP99D6REC4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.63■□□□□ 0.41
CFAP99D6REC4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CFAP99D6REC4 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CFAP99D6REC4 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CFAP99D6REC4 AC008764.6-201ENST00000595909 2069 ntBASIC17.63■□□□□ 0.41
CFAP99D6REC4 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.63■□□□□ 0.41
CFAP99D6REC4 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CFAP99D6REC4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.63■□□□□ 0.41
CFAP99D6REC4 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CFAP99D6REC4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CFAP99D6REC4 OR6D1P-203ENST00000641209 4860 ntBASIC17.63■□□□□ 0.41
CFAP99D6REC4 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CFAP99D6REC4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CFAP99D6REC4 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CFAP99D6REC4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.63■□□□□ 0.41
CFAP99D6REC4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CFAP99D6REC4 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
CFAP99D6REC4 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CFAP99D6REC4 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CFAP99D6REC4 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CFAP99D6REC4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CFAP99D6REC4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CFAP99D6REC4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.62■□□□□ 0.41
CFAP99D6REC4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CFAP99D6REC4 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CFAP99D6REC4 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
CFAP99D6REC4 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.62■□□□□ 0.41
CFAP99D6REC4 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CFAP99D6REC4 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CFAP99D6REC4 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CFAP99D6REC4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.62■□□□□ 0.41
CFAP99D6REC4 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
CFAP99D6REC4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CFAP99D6REC4 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CFAP99D6REC4 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CFAP99D6REC4 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CFAP99D6REC4 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.62■□□□□ 0.41
CFAP99D6REC4 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.62■□□□□ 0.41
CFAP99D6REC4 AC097374.2-201ENST00000618617 1306 ntBASIC17.62■□□□□ 0.41
CFAP99D6REC4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CFAP99D6REC4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.62■□□□□ 0.41
CFAP99D6REC4 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CFAP99D6REC4 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.62■□□□□ 0.41
CFAP99D6REC4 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CFAP99D6REC4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.62■□□□□ 0.41
CFAP99D6REC4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
CFAP99D6REC4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
CFAP99D6REC4 AC009053.2-201ENST00000563701 2365 ntBASIC17.61■□□□□ 0.41
CFAP99D6REC4 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.61■□□□□ 0.41
CFAP99D6REC4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CFAP99D6REC4 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.61■□□□□ 0.41
CFAP99D6REC4 TNRC18P3-201ENST00000441896 2691 ntBASIC17.61■□□□□ 0.41
CFAP99D6REC4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CFAP99D6REC4 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CFAP99D6REC4 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CFAP99D6REC4 AL845331.1-201ENST00000424978 1190 ntBASIC17.61■□□□□ 0.41
CFAP99D6REC4 MINOS1P3-201ENST00000457048 203 ntBASIC17.61■□□□□ 0.41
CFAP99D6REC4 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.61■□□□□ 0.41
CFAP99D6REC4 AC104819.1-201ENST00000504587 486 ntBASIC17.61■□□□□ 0.41
CFAP99D6REC4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.61■□□□□ 0.41
CFAP99D6REC4 AP000867.3-201ENST00000524675 377 ntBASIC17.61■□□□□ 0.41
CFAP99D6REC4 MIR3180-1-201ENST00000580374 94 ntBASIC17.61■□□□□ 0.41
CFAP99D6REC4 MIR3180-3-201ENST00000584616 94 ntBASIC17.61■□□□□ 0.41
CFAP99D6REC4 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CFAP99D6REC4 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
CFAP99D6REC4 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CFAP99D6REC4 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.61■□□□□ 0.41
CFAP99D6REC4 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CFAP99D6REC4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CFAP99D6REC4 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.61■□□□□ 0.41
CFAP99D6REC4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CFAP99D6REC4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CFAP99D6REC4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CFAP99D6REC4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CFAP99D6REC4 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.61■□□□□ 0.41
CFAP99D6REC4 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CFAP99D6REC4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CFAP99D6REC4 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CFAP99D6REC4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CFAP99D6REC4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CFAP99D6REC4 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.6■□□□□ 0.41
CFAP99D6REC4 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms