Protein–RNA interactions for Protein: A6NLF2

ELOA3D, Elongin-A3 member D, humanhuman

Predicted RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELOA3DA6NLF2 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
ELOA3DA6NLF2 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
ELOA3DA6NLF2 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
ELOA3DA6NLF2 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ELOA3DA6NLF2 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ELOA3DA6NLF2 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ELOA3DA6NLF2 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ELOA3DA6NLF2 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ELOA3DA6NLF2 AL645929.1-201ENST00000420084 975 ntBASIC16.18■□□□□ 0.18
ELOA3DA6NLF2 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.18■□□□□ 0.18
ELOA3DA6NLF2 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.18■□□□□ 0.18
ELOA3DA6NLF2 MTCL1P1-201ENST00000446207 792 ntBASIC16.18■□□□□ 0.18
ELOA3DA6NLF2 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ELOA3DA6NLF2 RNF126P1-202ENST00000569893 925 ntBASIC16.18■□□□□ 0.18
ELOA3DA6NLF2 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.18■□□□□ 0.18
ELOA3DA6NLF2 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.18■□□□□ 0.18
ELOA3DA6NLF2 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.18■□□□□ 0.18
ELOA3DA6NLF2 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ELOA3DA6NLF2 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
ELOA3DA6NLF2 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ELOA3DA6NLF2 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ELOA3DA6NLF2 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ELOA3DA6NLF2 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
ELOA3DA6NLF2 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.18■□□□□ 0.18
ELOA3DA6NLF2 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ELOA3DA6NLF2 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ELOA3DA6NLF2 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ELOA3DA6NLF2 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ELOA3DA6NLF2 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.18■□□□□ 0.18
ELOA3DA6NLF2 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.18■□□□□ 0.18
ELOA3DA6NLF2 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.18■□□□□ 0.18
ELOA3DA6NLF2 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ELOA3DA6NLF2 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ELOA3DA6NLF2 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.17■□□□□ 0.18
ELOA3DA6NLF2 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ELOA3DA6NLF2 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ELOA3DA6NLF2 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ELOA3DA6NLF2 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ELOA3DA6NLF2 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ELOA3DA6NLF2 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
ELOA3DA6NLF2 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ELOA3DA6NLF2 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.17■□□□□ 0.18
ELOA3DA6NLF2 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
ELOA3DA6NLF2 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ELOA3DA6NLF2 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ELOA3DA6NLF2 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
ELOA3DA6NLF2 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ELOA3DA6NLF2 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.17■□□□□ 0.18
ELOA3DA6NLF2 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
ELOA3DA6NLF2 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.17■□□□□ 0.18
ELOA3DA6NLF2 AL031133.1-201ENST00000406807 723 ntBASIC16.17■□□□□ 0.18
ELOA3DA6NLF2 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ELOA3DA6NLF2 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.17■□□□□ 0.18
ELOA3DA6NLF2 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ELOA3DA6NLF2 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.17■□□□□ 0.18
ELOA3DA6NLF2 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.17■□□□□ 0.18
ELOA3DA6NLF2 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.17■□□□□ 0.18
ELOA3DA6NLF2 LINC01451-201ENST00000623792 534 ntBASIC16.17■□□□□ 0.18
ELOA3DA6NLF2 AL358472.4-201ENST00000633140 710 ntBASIC16.17■□□□□ 0.18
ELOA3DA6NLF2 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ELOA3DA6NLF2 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.17■□□□□ 0.18
ELOA3DA6NLF2 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
ELOA3DA6NLF2 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ELOA3DA6NLF2 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ELOA3DA6NLF2 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ELOA3DA6NLF2 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.17■□□□□ 0.18
ELOA3DA6NLF2 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ELOA3DA6NLF2 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ELOA3DA6NLF2 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ELOA3DA6NLF2 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ELOA3DA6NLF2 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.16■□□□□ 0.18
ELOA3DA6NLF2 LINC00304-203ENST00000565008 1864 ntBASIC16.16■□□□□ 0.18
ELOA3DA6NLF2 HLA-J-201ENST00000462773 1622 ntBASIC16.16■□□□□ 0.18
ELOA3DA6NLF2 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
ELOA3DA6NLF2 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
ELOA3DA6NLF2 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ELOA3DA6NLF2 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ELOA3DA6NLF2 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ELOA3DA6NLF2 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ELOA3DA6NLF2 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.16■□□□□ 0.18
ELOA3DA6NLF2 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
ELOA3DA6NLF2 UPK3BP1-201ENST00000428678 509 ntBASIC16.16■□□□□ 0.18
ELOA3DA6NLF2 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.16■□□□□ 0.18
ELOA3DA6NLF2 SPDYE13P-201ENST00000445314 798 ntBASIC16.16■□□□□ 0.18
ELOA3DA6NLF2 AC068472.1-201ENST00000474589 881 ntBASIC16.16■□□□□ 0.18
ELOA3DA6NLF2 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.16■□□□□ 0.18
ELOA3DA6NLF2 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.16■□□□□ 0.18
ELOA3DA6NLF2 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ELOA3DA6NLF2 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ELOA3DA6NLF2 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ELOA3DA6NLF2 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.16■□□□□ 0.18
ELOA3DA6NLF2 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ELOA3DA6NLF2 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.16■□□□□ 0.18
ELOA3DA6NLF2 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
ELOA3DA6NLF2 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.16■□□□□ 0.18
ELOA3DA6NLF2 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
ELOA3DA6NLF2 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
ELOA3DA6NLF2 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ELOA3DA6NLF2 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ELOA3DA6NLF2 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms