Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
RCCD1A6NED2 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.76■□□□□ 0.59
RCCD1A6NED2 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RCCD1A6NED2 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
RCCD1A6NED2 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RCCD1A6NED2 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RCCD1A6NED2 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.76■□□□□ 0.59
RCCD1A6NED2 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RCCD1A6NED2 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.76■□□□□ 0.59
RCCD1A6NED2 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RCCD1A6NED2 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
RCCD1A6NED2 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RCCD1A6NED2 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RCCD1A6NED2 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
RCCD1A6NED2 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.76■□□□□ 0.59
RCCD1A6NED2 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.76■□□□□ 0.59
RCCD1A6NED2 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.76■□□□□ 0.59
RCCD1A6NED2 AL136038.4-201ENST00000603606 1261 ntBASIC18.76■□□□□ 0.59
RCCD1A6NED2 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.76■□□□□ 0.59
RCCD1A6NED2 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RCCD1A6NED2 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RCCD1A6NED2 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RCCD1A6NED2 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.76■□□□□ 0.59
RCCD1A6NED2 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RCCD1A6NED2 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RCCD1A6NED2 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
RCCD1A6NED2 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RCCD1A6NED2 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.76■□□□□ 0.59
RCCD1A6NED2 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RCCD1A6NED2 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RCCD1A6NED2 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.76■□□□□ 0.59
RCCD1A6NED2 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RCCD1A6NED2 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.76■□□□□ 0.59
RCCD1A6NED2 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RCCD1A6NED2 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RCCD1A6NED2 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
RCCD1A6NED2 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RCCD1A6NED2 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RCCD1A6NED2 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RCCD1A6NED2 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RCCD1A6NED2 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RCCD1A6NED2 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.75■□□□□ 0.59
RCCD1A6NED2 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RCCD1A6NED2 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RCCD1A6NED2 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RCCD1A6NED2 AC092171.3-201ENST00000610122 2651 ntBASIC18.75■□□□□ 0.59
RCCD1A6NED2 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.75■□□□□ 0.59
RCCD1A6NED2 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RCCD1A6NED2 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RCCD1A6NED2 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RCCD1A6NED2 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.75■□□□□ 0.59
RCCD1A6NED2 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.75■□□□□ 0.59
RCCD1A6NED2 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.75■□□□□ 0.59
RCCD1A6NED2 AL139327.4-201ENST00000612362 153 ntBASIC18.75■□□□□ 0.59
RCCD1A6NED2 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.75■□□□□ 0.59
RCCD1A6NED2 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.75■□□□□ 0.59
RCCD1A6NED2 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RCCD1A6NED2 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RCCD1A6NED2 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RCCD1A6NED2 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.75■□□□□ 0.59
RCCD1A6NED2 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.75■□□□□ 0.59
RCCD1A6NED2 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RCCD1A6NED2 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RCCD1A6NED2 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.75■□□□□ 0.59
RCCD1A6NED2 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RCCD1A6NED2 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
RCCD1A6NED2 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RCCD1A6NED2 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RCCD1A6NED2 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RCCD1A6NED2 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RCCD1A6NED2 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.74■□□□□ 0.59
RCCD1A6NED2 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.74■□□□□ 0.59
RCCD1A6NED2 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
RCCD1A6NED2 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
RCCD1A6NED2 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RCCD1A6NED2 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RCCD1A6NED2 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RCCD1A6NED2 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RCCD1A6NED2 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RCCD1A6NED2 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
RCCD1A6NED2 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RCCD1A6NED2 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.74■□□□□ 0.59
RCCD1A6NED2 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RCCD1A6NED2 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RCCD1A6NED2 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RCCD1A6NED2 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RCCD1A6NED2 HLA-F-220ENST00000434407 884 ntBASIC18.74■□□□□ 0.59
RCCD1A6NED2 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RCCD1A6NED2 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.74■□□□□ 0.59
RCCD1A6NED2 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RCCD1A6NED2 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RCCD1A6NED2 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RCCD1A6NED2 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.74■□□□□ 0.59
RCCD1A6NED2 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RCCD1A6NED2 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
RCCD1A6NED2 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RCCD1A6NED2 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RCCD1A6NED2 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RCCD1A6NED2 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.74■□□□□ 0.59
RCCD1A6NED2 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms