Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DRB4X5D2U9 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DRB4X5D2U9 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
HLA-DRB4X5D2U9 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DRB4X5D2U9 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC13.34□□□□□ -0.27
HLA-DRB4X5D2U9 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DRB4X5D2U9 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DRB4X5D2U9 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DRB4X5D2U9 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DRB4X5D2U9 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
HLA-DRB4X5D2U9 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DRB4X5D2U9 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DRB4X5D2U9 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DRB4X5D2U9 GUK1-204ENST00000366721 689 ntTSL 3 BASIC13.34□□□□□ -0.27
HLA-DRB4X5D2U9 AL645929.1-201ENST00000420084 975 ntBASIC13.34□□□□□ -0.27
HLA-DRB4X5D2U9 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC13.34□□□□□ -0.27
HLA-DRB4X5D2U9 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC13.34□□□□□ -0.27
HLA-DRB4X5D2U9 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DRB4X5D2U9 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC13.34□□□□□ -0.27
HLA-DRB4X5D2U9 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC13.34□□□□□ -0.27
HLA-DRB4X5D2U9 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC13.34□□□□□ -0.27
HLA-DRB4X5D2U9 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DRB4X5D2U9 AC009154.2-201ENST00000621177 724 ntBASIC13.34□□□□□ -0.27
HLA-DRB4X5D2U9 WDR6-223ENST00000627177 207 ntTSL 2 BASIC13.34□□□□□ -0.27
HLA-DRB4X5D2U9 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DRB4X5D2U9 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DRB4X5D2U9 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
HLA-DRB4X5D2U9 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DRB4X5D2U9 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC13.34□□□□□ -0.27
HLA-DRB4X5D2U9 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DRB4X5D2U9 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DRB4X5D2U9 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
HLA-DRB4X5D2U9 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC13.34□□□□□ -0.27
HLA-DRB4X5D2U9 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
HLA-DRB4X5D2U9 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DRB4X5D2U9 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
HLA-DRB4X5D2U9 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC13.34□□□□□ -0.27
HLA-DRB4X5D2U9 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DRB4X5D2U9 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DRB4X5D2U9 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DRB4X5D2U9 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DRB4X5D2U9 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC13.34□□□□□ -0.27
HLA-DRB4X5D2U9 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DRB4X5D2U9 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DRB4X5D2U9 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
HLA-DRB4X5D2U9 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC13.34□□□□□ -0.27
HLA-DRB4X5D2U9 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC13.33□□□□□ -0.27
HLA-DRB4X5D2U9 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC13.33□□□□□ -0.27
HLA-DRB4X5D2U9 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
HLA-DRB4X5D2U9 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
HLA-DRB4X5D2U9 AL353692.3-201ENST00000407031 1396 ntBASIC13.33□□□□□ -0.27
HLA-DRB4X5D2U9 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
HLA-DRB4X5D2U9 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
HLA-DRB4X5D2U9 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
HLA-DRB4X5D2U9 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB4X5D2U9 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
HLA-DRB4X5D2U9 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
HLA-DRB4X5D2U9 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC13.33□□□□□ -0.28
HLA-DRB4X5D2U9 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
HLA-DRB4X5D2U9 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC13.33□□□□□ -0.28
HLA-DRB4X5D2U9 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB4X5D2U9 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB4X5D2U9 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC13.33□□□□□ -0.28
HLA-DRB4X5D2U9 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB4X5D2U9 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC13.33□□□□□ -0.28
HLA-DRB4X5D2U9 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB4X5D2U9 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC13.33□□□□□ -0.28
HLA-DRB4X5D2U9 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB4X5D2U9 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB4X5D2U9 SPDYE13P-201ENST00000445314 798 ntBASIC13.33□□□□□ -0.28
HLA-DRB4X5D2U9 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB4X5D2U9 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC13.33□□□□□ -0.28
HLA-DRB4X5D2U9 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC13.33□□□□□ -0.28
HLA-DRB4X5D2U9 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC13.33□□□□□ -0.28
HLA-DRB4X5D2U9 AL390719.2-201ENST00000606993 987 ntBASIC13.33□□□□□ -0.28
HLA-DRB4X5D2U9 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
HLA-DRB4X5D2U9 AL590326.2-201ENST00000625139 305 ntBASIC13.33□□□□□ -0.28
HLA-DRB4X5D2U9 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
HLA-DRB4X5D2U9 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
HLA-DRB4X5D2U9 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
HLA-DRB4X5D2U9 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC13.33□□□□□ -0.28
HLA-DRB4X5D2U9 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB4X5D2U9 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB4X5D2U9 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
HLA-DRB4X5D2U9 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB4X5D2U9 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB4X5D2U9 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB4X5D2U9 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB4X5D2U9 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
HLA-DRB4X5D2U9 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB4X5D2U9 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB4X5D2U9 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
HLA-DRB4X5D2U9 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB4X5D2U9 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB4X5D2U9 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
HLA-DRB4X5D2U9 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB4X5D2U9 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB4X5D2U9 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
HLA-DRB4X5D2U9 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms