Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.47■□□□□ 0.39
SNX11Q9Y5W9 AC004967.1-201ENST00000453589 447 ntBASIC17.47■□□□□ 0.39
SNX11Q9Y5W9 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SNX11Q9Y5W9 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.47■□□□□ 0.39
SNX11Q9Y5W9 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.47■□□□□ 0.39
SNX11Q9Y5W9 AC002347.1-201ENST00000569543 541 ntBASIC17.47■□□□□ 0.39
SNX11Q9Y5W9 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.47■□□□□ 0.39
SNX11Q9Y5W9 AC005593.1-201ENST00000624894 515 ntBASIC17.47■□□□□ 0.39
SNX11Q9Y5W9 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.47■□□□□ 0.39
SNX11Q9Y5W9 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.47■□□□□ 0.39
SNX11Q9Y5W9 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNX11Q9Y5W9 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNX11Q9Y5W9 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNX11Q9Y5W9 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SNX11Q9Y5W9 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNX11Q9Y5W9 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNX11Q9Y5W9 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.47■□□□□ 0.39
SNX11Q9Y5W9 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNX11Q9Y5W9 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
SNX11Q9Y5W9 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SNX11Q9Y5W9 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNX11Q9Y5W9 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
SNX11Q9Y5W9 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SNX11Q9Y5W9 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNX11Q9Y5W9 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.47■□□□□ 0.39
SNX11Q9Y5W9 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 PMS2P2-201ENST00000425039 1128 ntBASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 KRT18P27-201ENST00000427733 1299 ntBASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 AC122714.2-201ENST00000502787 707 ntBASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 AC006557.2-201ENST00000592985 1240 ntBASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 AD001527.2-201ENST00000622994 785 ntBASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 AC073592.4-201ENST00000623827 446 ntBASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 AC134684.3-201ENST00000641758 218 ntBASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 AC079781.4-201ENST00000641908 219 ntBASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SNX11Q9Y5W9 AL354751.1-201ENST00000412768 1863 ntBASIC17.46■□□□□ 0.38
SNX11Q9Y5W9 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNX11Q9Y5W9 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.45■□□□□ 0.38
SNX11Q9Y5W9 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SNX11Q9Y5W9 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SNX11Q9Y5W9 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNX11Q9Y5W9 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SNX11Q9Y5W9 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNX11Q9Y5W9 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SNX11Q9Y5W9 AL133373.2-201ENST00000623187 2828 ntBASIC17.45■□□□□ 0.38
SNX11Q9Y5W9 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
SNX11Q9Y5W9 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNX11Q9Y5W9 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.45■□□□□ 0.38
SNX11Q9Y5W9 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SNX11Q9Y5W9 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNX11Q9Y5W9 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.45■□□□□ 0.38
SNX11Q9Y5W9 AC073621.1-201ENST00000392730 636 ntBASIC17.45■□□□□ 0.38
SNX11Q9Y5W9 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.45■□□□□ 0.38
SNX11Q9Y5W9 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SNX11Q9Y5W9 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.45■□□□□ 0.38
SNX11Q9Y5W9 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
SNX11Q9Y5W9 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.45■□□□□ 0.38
SNX11Q9Y5W9 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.45■□□□□ 0.38
SNX11Q9Y5W9 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SNX11Q9Y5W9 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SNX11Q9Y5W9 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.45■□□□□ 0.38
SNX11Q9Y5W9 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
SNX11Q9Y5W9 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms