Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGA6Q9Y5G7 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA6Q9Y5G7 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
PCDHGA6Q9Y5G7 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGA6Q9Y5G7 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGA6Q9Y5G7 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.04■□□□□ 0.32
PCDHGA6Q9Y5G7 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGA6Q9Y5G7 AL773604.1-201ENST00000617417 272 ntBASIC17.04■□□□□ 0.32
PCDHGA6Q9Y5G7 AC023511.2-201ENST00000618803 211 ntBASIC17.04■□□□□ 0.32
PCDHGA6Q9Y5G7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.04■□□□□ 0.32
PCDHGA6Q9Y5G7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
PCDHGA6Q9Y5G7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
PCDHGA6Q9Y5G7 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA6Q9Y5G7 SIRPAP1-201ENST00000448467 1770 ntBASIC17.04■□□□□ 0.32
PCDHGA6Q9Y5G7 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PCDHGA6Q9Y5G7 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDHGA6Q9Y5G7 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PCDHGA6Q9Y5G7 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA6Q9Y5G7 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PCDHGA6Q9Y5G7 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA6Q9Y5G7 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA6Q9Y5G7 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGA6Q9Y5G7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA6Q9Y5G7 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA6Q9Y5G7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA6Q9Y5G7 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA6Q9Y5G7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PCDHGA6Q9Y5G7 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA6Q9Y5G7 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHGA6Q9Y5G7 AC099398.1-201ENST00000567919 2776 ntBASIC17.03■□□□□ 0.32
PCDHGA6Q9Y5G7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PCDHGA6Q9Y5G7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDHGA6Q9Y5G7 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA6Q9Y5G7 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA6Q9Y5G7 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.03■□□□□ 0.32
PCDHGA6Q9Y5G7 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDHGA6Q9Y5G7 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDHGA6Q9Y5G7 AC096582.2-201ENST00000510860 516 ntBASIC17.03■□□□□ 0.32
PCDHGA6Q9Y5G7 RNA5SP419-201ENST00000515908 135 ntBASIC17.03■□□□□ 0.32
PCDHGA6Q9Y5G7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHGA6Q9Y5G7 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.03■□□□□ 0.32
PCDHGA6Q9Y5G7 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.03■□□□□ 0.32
PCDHGA6Q9Y5G7 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.03■□□□□ 0.32
PCDHGA6Q9Y5G7 AP001005.1-201ENST00000571755 1248 ntBASIC17.03■□□□□ 0.32
PCDHGA6Q9Y5G7 TP73-AS1-207ENST00000624167 988 ntBASIC17.03■□□□□ 0.32
PCDHGA6Q9Y5G7 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHGA6Q9Y5G7 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHGA6Q9Y5G7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA6Q9Y5G7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA6Q9Y5G7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA6Q9Y5G7 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA6Q9Y5G7 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHGA6Q9Y5G7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA6Q9Y5G7 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PCDHGA6Q9Y5G7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PCDHGA6Q9Y5G7 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA6Q9Y5G7 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA6Q9Y5G7 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA6Q9Y5G7 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA6Q9Y5G7 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA6Q9Y5G7 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.02■□□□□ 0.32
PCDHGA6Q9Y5G7 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA6Q9Y5G7 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
PCDHGA6Q9Y5G7 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA6Q9Y5G7 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA6Q9Y5G7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA6Q9Y5G7 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PCDHGA6Q9Y5G7 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHGA6Q9Y5G7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA6Q9Y5G7 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA6Q9Y5G7 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA6Q9Y5G7 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA6Q9Y5G7 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA6Q9Y5G7 AL590627.1-203ENST00000421194 1026 ntBASIC17.02■□□□□ 0.32
PCDHGA6Q9Y5G7 KRT18P67-201ENST00000432816 1264 ntBASIC17.02■□□□□ 0.32
PCDHGA6Q9Y5G7 FAM197Y8-203ENST00000450145 560 ntBASIC17.02■□□□□ 0.32
PCDHGA6Q9Y5G7 AC068472.1-201ENST00000474589 881 ntBASIC17.02■□□□□ 0.32
PCDHGA6Q9Y5G7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHGA6Q9Y5G7 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.02■□□□□ 0.32
PCDHGA6Q9Y5G7 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.02■□□□□ 0.32
PCDHGA6Q9Y5G7 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.02■□□□□ 0.31
PCDHGA6Q9Y5G7 MYLKP1-201ENST00000509077 1580 ntBASIC17.02■□□□□ 0.31
PCDHGA6Q9Y5G7 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
PCDHGA6Q9Y5G7 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHGA6Q9Y5G7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHGA6Q9Y5G7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA6Q9Y5G7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PCDHGA6Q9Y5G7 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA6Q9Y5G7 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA6Q9Y5G7 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA6Q9Y5G7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA6Q9Y5G7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA6Q9Y5G7 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA6Q9Y5G7 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA6Q9Y5G7 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA6Q9Y5G7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA6Q9Y5G7 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA6Q9Y5G7 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA6Q9Y5G7 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA6Q9Y5G7 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms