Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 VENTXP5-201ENST00000523979 775 ntBASIC16.8■□□□□ 0.28
PCDHGB3Q9Y5G1 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.8■□□□□ 0.28
PCDHGB3Q9Y5G1 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.8■□□□□ 0.28
PCDHGB3Q9Y5G1 AL136038.4-201ENST00000603606 1261 ntBASIC16.8■□□□□ 0.28
PCDHGB3Q9Y5G1 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHGB3Q9Y5G1 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGB3Q9Y5G1 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGB3Q9Y5G1 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB3Q9Y5G1 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHGB3Q9Y5G1 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHGB3Q9Y5G1 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB3Q9Y5G1 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PCDHGB3Q9Y5G1 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB3Q9Y5G1 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
PCDHGB3Q9Y5G1 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB3Q9Y5G1 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB3Q9Y5G1 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB3Q9Y5G1 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB3Q9Y5G1 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PCDHGB3Q9Y5G1 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB3Q9Y5G1 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDHGB3Q9Y5G1 AL391807.1-203ENST00000604392 2365 ntBASIC16.79■□□□□ 0.28
PCDHGB3Q9Y5G1 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB3Q9Y5G1 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB3Q9Y5G1 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
PCDHGB3Q9Y5G1 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB3Q9Y5G1 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
PCDHGB3Q9Y5G1 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PCDHGB3Q9Y5G1 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PCDHGB3Q9Y5G1 AD000864.1-201ENST00000624076 2295 ntBASIC16.79■□□□□ 0.28
PCDHGB3Q9Y5G1 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDHGB3Q9Y5G1 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDHGB3Q9Y5G1 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
PCDHGB3Q9Y5G1 HBZP1-201ENST00000354915 429 ntBASIC16.79■□□□□ 0.28
PCDHGB3Q9Y5G1 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB3Q9Y5G1 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PCDHGB3Q9Y5G1 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDHGB3Q9Y5G1 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB3Q9Y5G1 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.79■□□□□ 0.28
PCDHGB3Q9Y5G1 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
PCDHGB3Q9Y5G1 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.79■□□□□ 0.28
PCDHGB3Q9Y5G1 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB3Q9Y5G1 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB3Q9Y5G1 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PCDHGB3Q9Y5G1 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB3Q9Y5G1 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB3Q9Y5G1 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB3Q9Y5G1 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB3Q9Y5G1 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB3Q9Y5G1 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB3Q9Y5G1 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB3Q9Y5G1 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB3Q9Y5G1 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
PCDHGB3Q9Y5G1 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
PCDHGB3Q9Y5G1 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB3Q9Y5G1 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB3Q9Y5G1 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PCDHGB3Q9Y5G1 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGB3Q9Y5G1 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB3Q9Y5G1 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB3Q9Y5G1 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.78■□□□□ 0.28
PCDHGB3Q9Y5G1 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB3Q9Y5G1 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGB3Q9Y5G1 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
PCDHGB3Q9Y5G1 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB3Q9Y5G1 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB3Q9Y5G1 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB3Q9Y5G1 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDHGB3Q9Y5G1 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB3Q9Y5G1 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB3Q9Y5G1 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB3Q9Y5G1 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB3Q9Y5G1 SPDYE15P-201ENST00000424157 909 ntBASIC16.78■□□□□ 0.28
PCDHGB3Q9Y5G1 KRT18P48-201ENST00000434763 852 ntBASIC16.78■□□□□ 0.28
PCDHGB3Q9Y5G1 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.78■□□□□ 0.28
PCDHGB3Q9Y5G1 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.78■□□□□ 0.28
PCDHGB3Q9Y5G1 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB3Q9Y5G1 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PCDHGB3Q9Y5G1 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGB3Q9Y5G1 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
PCDHGB3Q9Y5G1 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
PCDHGB3Q9Y5G1 AC116407.2-201ENST00000613639 860 ntBASIC16.78■□□□□ 0.28
PCDHGB3Q9Y5G1 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDHGB3Q9Y5G1 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB3Q9Y5G1 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB3Q9Y5G1 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDHGB3Q9Y5G1 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGB3Q9Y5G1 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB3Q9Y5G1 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB3Q9Y5G1 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGB3Q9Y5G1 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PCDHGB3Q9Y5G1 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PCDHGB3Q9Y5G1 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB3Q9Y5G1 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB3Q9Y5G1 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PCDHGB3Q9Y5G1 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB3Q9Y5G1 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PCDHGB3Q9Y5G1 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB3Q9Y5G1 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDHGB3Q9Y5G1 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms