Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
HCN4Q9Y3Q4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
HCN4Q9Y3Q4 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.06■□□□□ 0.48
HCN4Q9Y3Q4 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.06■□□□□ 0.48
HCN4Q9Y3Q4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.06■□□□□ 0.48
HCN4Q9Y3Q4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HCN4Q9Y3Q4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HCN4Q9Y3Q4 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.06■□□□□ 0.48
HCN4Q9Y3Q4 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.06■□□□□ 0.48
HCN4Q9Y3Q4 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
HCN4Q9Y3Q4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.06■□□□□ 0.48
HCN4Q9Y3Q4 AC022145.2-201ENST00000598203 171 ntBASIC18.06■□□□□ 0.48
HCN4Q9Y3Q4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
HCN4Q9Y3Q4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
HCN4Q9Y3Q4 AL138781.2-201ENST00000617896 1843 ntBASIC18.06■□□□□ 0.48
HCN4Q9Y3Q4 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.06■□□□□ 0.48
HCN4Q9Y3Q4 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HCN4Q9Y3Q4 AC006333.2-201ENST00000607957 2099 ntBASIC18.06■□□□□ 0.48
HCN4Q9Y3Q4 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HCN4Q9Y3Q4 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HCN4Q9Y3Q4 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.06■□□□□ 0.48
HCN4Q9Y3Q4 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
HCN4Q9Y3Q4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HCN4Q9Y3Q4 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.06■□□□□ 0.48
HCN4Q9Y3Q4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
HCN4Q9Y3Q4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
HCN4Q9Y3Q4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
HCN4Q9Y3Q4 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HCN4Q9Y3Q4 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.05■□□□□ 0.48
HCN4Q9Y3Q4 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HCN4Q9Y3Q4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.05■□□□□ 0.48
HCN4Q9Y3Q4 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
HCN4Q9Y3Q4 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HCN4Q9Y3Q4 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
HCN4Q9Y3Q4 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HCN4Q9Y3Q4 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.05■□□□□ 0.48
HCN4Q9Y3Q4 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.05■□□□□ 0.48
HCN4Q9Y3Q4 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.05■□□□□ 0.48
HCN4Q9Y3Q4 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.05■□□□□ 0.48
HCN4Q9Y3Q4 AC074386.1-202ENST00000463561 864 ntBASIC18.05■□□□□ 0.48
HCN4Q9Y3Q4 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC18.05■□□□□ 0.48
HCN4Q9Y3Q4 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC18.05■□□□□ 0.48
HCN4Q9Y3Q4 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.05■□□□□ 0.48
HCN4Q9Y3Q4 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.05■□□□□ 0.48
HCN4Q9Y3Q4 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HCN4Q9Y3Q4 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HCN4Q9Y3Q4 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.05■□□□□ 0.48
HCN4Q9Y3Q4 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
HCN4Q9Y3Q4 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.05■□□□□ 0.48
HCN4Q9Y3Q4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HCN4Q9Y3Q4 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
HCN4Q9Y3Q4 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HCN4Q9Y3Q4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HCN4Q9Y3Q4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HCN4Q9Y3Q4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.05■□□□□ 0.48
HCN4Q9Y3Q4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HCN4Q9Y3Q4 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HCN4Q9Y3Q4 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
HCN4Q9Y3Q4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.04■□□□□ 0.48
HCN4Q9Y3Q4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HCN4Q9Y3Q4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.04■□□□□ 0.48
HCN4Q9Y3Q4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HCN4Q9Y3Q4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.04■□□□□ 0.48
HCN4Q9Y3Q4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HCN4Q9Y3Q4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.04■□□□□ 0.48
HCN4Q9Y3Q4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HCN4Q9Y3Q4 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
HCN4Q9Y3Q4 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HCN4Q9Y3Q4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HCN4Q9Y3Q4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HCN4Q9Y3Q4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HCN4Q9Y3Q4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HCN4Q9Y3Q4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HCN4Q9Y3Q4 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HCN4Q9Y3Q4 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HCN4Q9Y3Q4 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
HCN4Q9Y3Q4 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.04■□□□□ 0.48
HCN4Q9Y3Q4 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.04■□□□□ 0.48
HCN4Q9Y3Q4 AC004945.1-201ENST00000416738 983 ntBASIC18.04■□□□□ 0.48
HCN4Q9Y3Q4 AL512638.1-201ENST00000457493 794 ntBASIC18.04■□□□□ 0.48
HCN4Q9Y3Q4 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.04■□□□□ 0.48
HCN4Q9Y3Q4 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.04■□□□□ 0.48
HCN4Q9Y3Q4 KRT19P2-202ENST00000557173 1012 ntBASIC18.04■□□□□ 0.48
HCN4Q9Y3Q4 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.04■□□□□ 0.48
HCN4Q9Y3Q4 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HCN4Q9Y3Q4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HCN4Q9Y3Q4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HCN4Q9Y3Q4 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HCN4Q9Y3Q4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HCN4Q9Y3Q4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HCN4Q9Y3Q4 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.04■□□□□ 0.48
HCN4Q9Y3Q4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
HCN4Q9Y3Q4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
HCN4Q9Y3Q4 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HCN4Q9Y3Q4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
HCN4Q9Y3Q4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.03■□□□□ 0.48
HCN4Q9Y3Q4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HCN4Q9Y3Q4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.03■□□□□ 0.48
HCN4Q9Y3Q4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HCN4Q9Y3Q4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms