Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
RCL1Q9Y2P8 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
RCL1Q9Y2P8 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
RCL1Q9Y2P8 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RCL1Q9Y2P8 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RCL1Q9Y2P8 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
RCL1Q9Y2P8 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RCL1Q9Y2P8 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RCL1Q9Y2P8 AC022898.2-201ENST00000616822 1312 ntBASIC14.48□□□□□ -0.09
RCL1Q9Y2P8 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RCL1Q9Y2P8 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
RCL1Q9Y2P8 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RCL1Q9Y2P8 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RCL1Q9Y2P8 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RCL1Q9Y2P8 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
RCL1Q9Y2P8 KRT18P23-201ENST00000435622 1283 ntBASIC14.48□□□□□ -0.09
RCL1Q9Y2P8 B3GAT3P1-201ENST00000471720 806 ntBASIC14.48□□□□□ -0.09
RCL1Q9Y2P8 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC14.48□□□□□ -0.09
RCL1Q9Y2P8 CR392000.1-201ENST00000624770 1228 ntBASIC14.48□□□□□ -0.09
RCL1Q9Y2P8 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RCL1Q9Y2P8 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.48□□□□□ -0.09
RCL1Q9Y2P8 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RCL1Q9Y2P8 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC14.48□□□□□ -0.09
RCL1Q9Y2P8 REXO1L11P-201ENST00000620964 1927 ntBASIC14.48□□□□□ -0.09
RCL1Q9Y2P8 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
RCL1Q9Y2P8 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RCL1Q9Y2P8 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RCL1Q9Y2P8 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RCL1Q9Y2P8 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.48□□□□□ -0.09
RCL1Q9Y2P8 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
RCL1Q9Y2P8 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
RCL1Q9Y2P8 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.48□□□□□ -0.09
RCL1Q9Y2P8 AC068418.2-201ENST00000577309 3703 ntBASIC14.48□□□□□ -0.09
RCL1Q9Y2P8 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RCL1Q9Y2P8 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC14.47□□□□□ -0.09
RCL1Q9Y2P8 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
RCL1Q9Y2P8 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RCL1Q9Y2P8 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RCL1Q9Y2P8 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.47□□□□□ -0.09
RCL1Q9Y2P8 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.47□□□□□ -0.09
RCL1Q9Y2P8 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RCL1Q9Y2P8 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC14.47□□□□□ -0.09
RCL1Q9Y2P8 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
RCL1Q9Y2P8 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
RCL1Q9Y2P8 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC14.47□□□□□ -0.09
RCL1Q9Y2P8 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
RCL1Q9Y2P8 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
RCL1Q9Y2P8 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RCL1Q9Y2P8 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RCL1Q9Y2P8 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RCL1Q9Y2P8 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RCL1Q9Y2P8 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.47□□□□□ -0.09
RCL1Q9Y2P8 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RCL1Q9Y2P8 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC14.47□□□□□ -0.09
RCL1Q9Y2P8 GAS7-202ENST00000396115 929 ntTSL 5 BASIC14.47□□□□□ -0.09
RCL1Q9Y2P8 AC133681.1-201ENST00000465482 601 ntBASIC14.47□□□□□ -0.09
RCL1Q9Y2P8 FDX2-207ENST00000494368 584 ntTSL 4 BASIC14.47□□□□□ -0.09
RCL1Q9Y2P8 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC14.47□□□□□ -0.09
RCL1Q9Y2P8 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC14.47□□□□□ -0.09
RCL1Q9Y2P8 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC14.47□□□□□ -0.09
RCL1Q9Y2P8 MIR4674-201ENST00000582457 87 ntBASIC14.47□□□□□ -0.09
RCL1Q9Y2P8 MIR6786-201ENST00000616843 113 ntBASIC14.47□□□□□ -0.09
RCL1Q9Y2P8 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
RCL1Q9Y2P8 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RCL1Q9Y2P8 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
RCL1Q9Y2P8 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
RCL1Q9Y2P8 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.47□□□□□ -0.09
RCL1Q9Y2P8 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RCL1Q9Y2P8 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
RCL1Q9Y2P8 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
RCL1Q9Y2P8 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RCL1Q9Y2P8 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RCL1Q9Y2P8 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RCL1Q9Y2P8 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RCL1Q9Y2P8 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC14.46□□□□□ -0.09
RCL1Q9Y2P8 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RCL1Q9Y2P8 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RCL1Q9Y2P8 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
RCL1Q9Y2P8 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
RCL1Q9Y2P8 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.46□□□□□ -0.09
RCL1Q9Y2P8 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
RCL1Q9Y2P8 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RCL1Q9Y2P8 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.46□□□□□ -0.09
RCL1Q9Y2P8 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.46□□□□□ -0.09
RCL1Q9Y2P8 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
RCL1Q9Y2P8 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RCL1Q9Y2P8 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RCL1Q9Y2P8 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC14.46□□□□□ -0.09
RCL1Q9Y2P8 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RCL1Q9Y2P8 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RCL1Q9Y2P8 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC14.46□□□□□ -0.09
RCL1Q9Y2P8 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC14.46□□□□□ -0.09
RCL1Q9Y2P8 AC009065.1-201ENST00000564055 1225 ntBASIC14.46□□□□□ -0.09
RCL1Q9Y2P8 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC14.46□□□□□ -0.09
RCL1Q9Y2P8 AP000692.2-201ENST00000608391 879 ntBASIC14.46□□□□□ -0.09
RCL1Q9Y2P8 AC110285.5-201ENST00000611501 352 ntBASIC14.46□□□□□ -0.09
RCL1Q9Y2P8 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
RCL1Q9Y2P8 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
RCL1Q9Y2P8 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
RCL1Q9Y2P8 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms