Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.71■□□□□ 0.27
LHX6Q9UPM6 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LHX6Q9UPM6 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LHX6Q9UPM6 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
LHX6Q9UPM6 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.71■□□□□ 0.26
LHX6Q9UPM6 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.71■□□□□ 0.26
LHX6Q9UPM6 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LHX6Q9UPM6 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
LHX6Q9UPM6 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LHX6Q9UPM6 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.7■□□□□ 0.26
LHX6Q9UPM6 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LHX6Q9UPM6 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LHX6Q9UPM6 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LHX6Q9UPM6 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
LHX6Q9UPM6 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LHX6Q9UPM6 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LHX6Q9UPM6 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LHX6Q9UPM6 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC16.7■□□□□ 0.26
LHX6Q9UPM6 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
LHX6Q9UPM6 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
LHX6Q9UPM6 ELK2BP-201ENST00000415014 1224 ntBASIC16.7■□□□□ 0.26
LHX6Q9UPM6 KRT18P27-201ENST00000427733 1299 ntBASIC16.7■□□□□ 0.26
LHX6Q9UPM6 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LHX6Q9UPM6 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.7■□□□□ 0.26
LHX6Q9UPM6 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.7■□□□□ 0.26
LHX6Q9UPM6 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.7■□□□□ 0.26
LHX6Q9UPM6 AC136632.2-201ENST00000512891 861 ntBASIC16.7■□□□□ 0.26
LHX6Q9UPM6 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LHX6Q9UPM6 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.7■□□□□ 0.26
LHX6Q9UPM6 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.7■□□□□ 0.26
LHX6Q9UPM6 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.7■□□□□ 0.26
LHX6Q9UPM6 AL138831.2-201ENST00000606564 490 ntBASIC16.7■□□□□ 0.26
LHX6Q9UPM6 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LHX6Q9UPM6 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
LHX6Q9UPM6 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
LHX6Q9UPM6 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LHX6Q9UPM6 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LHX6Q9UPM6 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LHX6Q9UPM6 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LHX6Q9UPM6 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LHX6Q9UPM6 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.7■□□□□ 0.26
LHX6Q9UPM6 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.7■□□□□ 0.26
LHX6Q9UPM6 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
LHX6Q9UPM6 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
LHX6Q9UPM6 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
LHX6Q9UPM6 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
LHX6Q9UPM6 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
LHX6Q9UPM6 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LHX6Q9UPM6 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LHX6Q9UPM6 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LHX6Q9UPM6 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LHX6Q9UPM6 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LHX6Q9UPM6 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
LHX6Q9UPM6 HSFY1P1-201ENST00000423928 1178 ntBASIC16.69■□□□□ 0.26
LHX6Q9UPM6 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LHX6Q9UPM6 ACTG1P14-201ENST00000446382 1122 ntBASIC16.69■□□□□ 0.26
LHX6Q9UPM6 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.69■□□□□ 0.26
LHX6Q9UPM6 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.69■□□□□ 0.26
LHX6Q9UPM6 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.69■□□□□ 0.26
LHX6Q9UPM6 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LHX6Q9UPM6 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.69■□□□□ 0.26
LHX6Q9UPM6 MIR4751-201ENST00000578027 74 ntBASIC16.69■□□□□ 0.26
LHX6Q9UPM6 AL390955.2-201ENST00000603032 514 ntBASIC16.69■□□□□ 0.26
LHX6Q9UPM6 ACTG1P22-201ENST00000603793 1099 ntBASIC16.69■□□□□ 0.26
LHX6Q9UPM6 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LHX6Q9UPM6 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.69■□□□□ 0.26
LHX6Q9UPM6 AL391262.2-201ENST00000622466 494 ntBASIC16.69■□□□□ 0.26
LHX6Q9UPM6 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
LHX6Q9UPM6 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LHX6Q9UPM6 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LHX6Q9UPM6 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LHX6Q9UPM6 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LHX6Q9UPM6 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LHX6Q9UPM6 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LHX6Q9UPM6 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.69■□□□□ 0.26
LHX6Q9UPM6 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.69■□□□□ 0.26
LHX6Q9UPM6 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LHX6Q9UPM6 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LHX6Q9UPM6 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
LHX6Q9UPM6 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
LHX6Q9UPM6 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LHX6Q9UPM6 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.69■□□□□ 0.26
LHX6Q9UPM6 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.69■□□□□ 0.26
LHX6Q9UPM6 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LHX6Q9UPM6 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LHX6Q9UPM6 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
LHX6Q9UPM6 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.68■□□□□ 0.26
LHX6Q9UPM6 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LHX6Q9UPM6 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LHX6Q9UPM6 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LHX6Q9UPM6 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LHX6Q9UPM6 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LHX6Q9UPM6 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.68■□□□□ 0.26
LHX6Q9UPM6 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.68■□□□□ 0.26
LHX6Q9UPM6 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LHX6Q9UPM6 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.68■□□□□ 0.26
LHX6Q9UPM6 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LHX6Q9UPM6 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.68■□□□□ 0.26
LHX6Q9UPM6 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.68■□□□□ 0.26
LHX6Q9UPM6 SSR1P1-201ENST00000407630 814 ntBASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms