Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HDAC9Q9UKV0 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC21.06■□□□□ 0.96
HDAC9Q9UKV0 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HDAC9Q9UKV0 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
HDAC9Q9UKV0 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.06■□□□□ 0.96
HDAC9Q9UKV0 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
HDAC9Q9UKV0 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
HDAC9Q9UKV0 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HDAC9Q9UKV0 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HDAC9Q9UKV0 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HDAC9Q9UKV0 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC21.06■□□□□ 0.96
HDAC9Q9UKV0 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC21.06■□□□□ 0.96
HDAC9Q9UKV0 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC21.06■□□□□ 0.96
HDAC9Q9UKV0 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC21.06■□□□□ 0.96
HDAC9Q9UKV0 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
HDAC9Q9UKV0 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
HDAC9Q9UKV0 AC096734.2-201ENST00000562054 433 ntBASIC21.06■□□□□ 0.96
HDAC9Q9UKV0 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC21.06■□□□□ 0.96
HDAC9Q9UKV0 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC21.06■□□□□ 0.96
HDAC9Q9UKV0 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HDAC9Q9UKV0 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HDAC9Q9UKV0 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC21.06■□□□□ 0.96
HDAC9Q9UKV0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.06■□□□□ 0.96
HDAC9Q9UKV0 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HDAC9Q9UKV0 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HDAC9Q9UKV0 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
HDAC9Q9UKV0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.05■□□□□ 0.96
HDAC9Q9UKV0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.05■□□□□ 0.96
HDAC9Q9UKV0 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
HDAC9Q9UKV0 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21.05■□□□□ 0.96
HDAC9Q9UKV0 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.05■□□□□ 0.96
HDAC9Q9UKV0 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC21.05■□□□□ 0.96
HDAC9Q9UKV0 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HDAC9Q9UKV0 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HDAC9Q9UKV0 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
HDAC9Q9UKV0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC21.05■□□□□ 0.96
HDAC9Q9UKV0 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HDAC9Q9UKV0 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HDAC9Q9UKV0 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC21.05■□□□□ 0.96
HDAC9Q9UKV0 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HDAC9Q9UKV0 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HDAC9Q9UKV0 AP002414.1-201ENST00000391405 1147 ntBASIC21.05■□□□□ 0.96
HDAC9Q9UKV0 IGLL3P-201ENST00000412472 434 ntBASIC21.05■□□□□ 0.96
HDAC9Q9UKV0 AL645939.2-201ENST00000427340 991 ntBASIC21.05■□□□□ 0.96
HDAC9Q9UKV0 WBP2-203ENST00000433525 928 ntTSL 2 BASIC21.05■□□□□ 0.96
HDAC9Q9UKV0 DDX43P3-201ENST00000441064 443 ntBASIC21.05■□□□□ 0.96
HDAC9Q9UKV0 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HDAC9Q9UKV0 SMN2-210ENST00000511812 867 ntTSL 2 BASIC21.05■□□□□ 0.96
HDAC9Q9UKV0 CIPC-205ENST00000555437 566 ntTSL 3 BASIC21.05■□□□□ 0.96
HDAC9Q9UKV0 RIN3-211ENST00000557762 517 ntTSL 3 BASIC21.05■□□□□ 0.96
HDAC9Q9UKV0 AC004877.2-201ENST00000623941 599 ntBASIC21.05■□□□□ 0.96
HDAC9Q9UKV0 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC21.05■□□□□ 0.96
HDAC9Q9UKV0 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HDAC9Q9UKV0 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HDAC9Q9UKV0 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
HDAC9Q9UKV0 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HDAC9Q9UKV0 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HDAC9Q9UKV0 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.05■□□□□ 0.96
HDAC9Q9UKV0 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HDAC9Q9UKV0 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HDAC9Q9UKV0 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HDAC9Q9UKV0 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HDAC9Q9UKV0 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
HDAC9Q9UKV0 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HDAC9Q9UKV0 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
HDAC9Q9UKV0 MIR770-201ENST00000390219 98 ntBASIC21.04■□□□□ 0.96
HDAC9Q9UKV0 PTCHD3P3-201ENST00000403073 906 ntBASIC21.04■□□□□ 0.96
HDAC9Q9UKV0 COX20P2-201ENST00000452636 358 ntBASIC21.04■□□□□ 0.96
HDAC9Q9UKV0 CCND1-203ENST00000536559 553 ntTSL 3 BASIC21.04■□□□□ 0.96
HDAC9Q9UKV0 PDPK2P-202ENST00000562415 1191 ntBASIC21.04■□□□□ 0.96
HDAC9Q9UKV0 AP002472.1-201ENST00000577490 586 ntBASIC21.04■□□□□ 0.96
HDAC9Q9UKV0 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
HDAC9Q9UKV0 ORC5-208ENST00000626700 344 ntTSL 3 BASIC21.04■□□□□ 0.96
HDAC9Q9UKV0 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
HDAC9Q9UKV0 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
HDAC9Q9UKV0 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
HDAC9Q9UKV0 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
HDAC9Q9UKV0 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
HDAC9Q9UKV0 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.04■□□□□ 0.96
HDAC9Q9UKV0 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HDAC9Q9UKV0 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC21.04■□□□□ 0.96
HDAC9Q9UKV0 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC21.04■□□□□ 0.96
HDAC9Q9UKV0 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
HDAC9Q9UKV0 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
HDAC9Q9UKV0 BCAR1-209ENST00000546196 1340 ntBASIC21.04■□□□□ 0.96
HDAC9Q9UKV0 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
HDAC9Q9UKV0 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HDAC9Q9UKV0 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HDAC9Q9UKV0 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HDAC9Q9UKV0 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HDAC9Q9UKV0 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HDAC9Q9UKV0 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC21.03■□□□□ 0.96
HDAC9Q9UKV0 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HDAC9Q9UKV0 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HDAC9Q9UKV0 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
HDAC9Q9UKV0 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HDAC9Q9UKV0 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
HDAC9Q9UKV0 LHX6-205ENST00000464484 666 ntTSL 2 BASIC21.03■□□□□ 0.96
HDAC9Q9UKV0 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC21.03■□□□□ 0.96
HDAC9Q9UKV0 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms