Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GTF3C4Q9UKN8 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GTF3C4Q9UKN8 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GTF3C4Q9UKN8 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GTF3C4Q9UKN8 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
GTF3C4Q9UKN8 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GTF3C4Q9UKN8 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GTF3C4Q9UKN8 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.02■□□□□ 0.64
GTF3C4Q9UKN8 AC004870.1-201ENST00000315132 882 ntBASIC19.02■□□□□ 0.64
GTF3C4Q9UKN8 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GTF3C4Q9UKN8 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GTF3C4Q9UKN8 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
GTF3C4Q9UKN8 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
GTF3C4Q9UKN8 RCN1P2-201ENST00000398357 915 ntBASIC19.02■□□□□ 0.64
GTF3C4Q9UKN8 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
GTF3C4Q9UKN8 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.02■□□□□ 0.64
GTF3C4Q9UKN8 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GTF3C4Q9UKN8 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.02■□□□□ 0.64
GTF3C4Q9UKN8 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.64
GTF3C4Q9UKN8 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.02■□□□□ 0.64
GTF3C4Q9UKN8 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.02■□□□□ 0.64
GTF3C4Q9UKN8 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.02■□□□□ 0.64
GTF3C4Q9UKN8 MIR5100-201ENST00000579544 119 ntBASIC19.02■□□□□ 0.64
GTF3C4Q9UKN8 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.02■□□□□ 0.64
GTF3C4Q9UKN8 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.02■□□□□ 0.64
GTF3C4Q9UKN8 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
GTF3C4Q9UKN8 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
GTF3C4Q9UKN8 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
GTF3C4Q9UKN8 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.02■□□□□ 0.63
GTF3C4Q9UKN8 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.02■□□□□ 0.63
GTF3C4Q9UKN8 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
GTF3C4Q9UKN8 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
GTF3C4Q9UKN8 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
GTF3C4Q9UKN8 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GTF3C4Q9UKN8 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GTF3C4Q9UKN8 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.01■□□□□ 0.63
GTF3C4Q9UKN8 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.01■□□□□ 0.63
GTF3C4Q9UKN8 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
GTF3C4Q9UKN8 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
GTF3C4Q9UKN8 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GTF3C4Q9UKN8 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
GTF3C4Q9UKN8 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GTF3C4Q9UKN8 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GTF3C4Q9UKN8 LTB4R2-202ENST00000528054 3092 ntBASIC19.01■□□□□ 0.63
GTF3C4Q9UKN8 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
GTF3C4Q9UKN8 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
GTF3C4Q9UKN8 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.01■□□□□ 0.63
GTF3C4Q9UKN8 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.01■□□□□ 0.63
GTF3C4Q9UKN8 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GTF3C4Q9UKN8 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GTF3C4Q9UKN8 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.01■□□□□ 0.63
GTF3C4Q9UKN8 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.01■□□□□ 0.63
GTF3C4Q9UKN8 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.01■□□□□ 0.63
GTF3C4Q9UKN8 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.01■□□□□ 0.63
GTF3C4Q9UKN8 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GTF3C4Q9UKN8 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.01■□□□□ 0.63
GTF3C4Q9UKN8 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GTF3C4Q9UKN8 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
GTF3C4Q9UKN8 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.01■□□□□ 0.63
GTF3C4Q9UKN8 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.01■□□□□ 0.63
GTF3C4Q9UKN8 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GTF3C4Q9UKN8 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.01■□□□□ 0.63
GTF3C4Q9UKN8 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GTF3C4Q9UKN8 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
GTF3C4Q9UKN8 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GTF3C4Q9UKN8 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
GTF3C4Q9UKN8 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GTF3C4Q9UKN8 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
GTF3C4Q9UKN8 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GTF3C4Q9UKN8 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
GTF3C4Q9UKN8 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
GTF3C4Q9UKN8 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GTF3C4Q9UKN8 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.01■□□□□ 0.63
GTF3C4Q9UKN8 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.01■□□□□ 0.63
GTF3C4Q9UKN8 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GTF3C4Q9UKN8 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19■□□□□ 0.63
GTF3C4Q9UKN8 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19■□□□□ 0.63
GTF3C4Q9UKN8 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GTF3C4Q9UKN8 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GTF3C4Q9UKN8 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19■□□□□ 0.63
GTF3C4Q9UKN8 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GTF3C4Q9UKN8 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19■□□□□ 0.63
GTF3C4Q9UKN8 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19■□□□□ 0.63
GTF3C4Q9UKN8 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
GTF3C4Q9UKN8 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GTF3C4Q9UKN8 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
GTF3C4Q9UKN8 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19■□□□□ 0.63
GTF3C4Q9UKN8 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19■□□□□ 0.63
GTF3C4Q9UKN8 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19■□□□□ 0.63
GTF3C4Q9UKN8 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
GTF3C4Q9UKN8 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19■□□□□ 0.63
GTF3C4Q9UKN8 AC009533.2-201ENST00000543664 586 ntBASIC19■□□□□ 0.63
GTF3C4Q9UKN8 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19■□□□□ 0.63
GTF3C4Q9UKN8 AL591684.3-201ENST00000605187 298 ntBASIC19■□□□□ 0.63
GTF3C4Q9UKN8 AC114341.1-201ENST00000618070 349 ntBASIC19■□□□□ 0.63
GTF3C4Q9UKN8 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19■□□□□ 0.63
GTF3C4Q9UKN8 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GTF3C4Q9UKN8 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
GTF3C4Q9UKN8 AL355312.1-201ENST00000407115 2176 ntBASIC19■□□□□ 0.63
GTF3C4Q9UKN8 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms