Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NIPSNAP3AQ9UFN0 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NIPSNAP3AQ9UFN0 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.91■□□□□ 0.3
NIPSNAP3AQ9UFN0 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NIPSNAP3AQ9UFN0 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.91■□□□□ 0.3
NIPSNAP3AQ9UFN0 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NIPSNAP3AQ9UFN0 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
NIPSNAP3AQ9UFN0 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NIPSNAP3AQ9UFN0 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.91■□□□□ 0.3
NIPSNAP3AQ9UFN0 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
NIPSNAP3AQ9UFN0 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NIPSNAP3AQ9UFN0 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.91■□□□□ 0.3
NIPSNAP3AQ9UFN0 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NIPSNAP3AQ9UFN0 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
NIPSNAP3AQ9UFN0 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NIPSNAP3AQ9UFN0 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NIPSNAP3AQ9UFN0 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NIPSNAP3AQ9UFN0 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.91■□□□□ 0.3
NIPSNAP3AQ9UFN0 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.91■□□□□ 0.3
NIPSNAP3AQ9UFN0 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
NIPSNAP3AQ9UFN0 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.91■□□□□ 0.3
NIPSNAP3AQ9UFN0 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NIPSNAP3AQ9UFN0 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.91■□□□□ 0.3
NIPSNAP3AQ9UFN0 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NIPSNAP3AQ9UFN0 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.91■□□□□ 0.3
NIPSNAP3AQ9UFN0 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.91■□□□□ 0.3
NIPSNAP3AQ9UFN0 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
NIPSNAP3AQ9UFN0 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NIPSNAP3AQ9UFN0 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NIPSNAP3AQ9UFN0 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NIPSNAP3AQ9UFN0 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.91■□□□□ 0.3
NIPSNAP3AQ9UFN0 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
NIPSNAP3AQ9UFN0 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
NIPSNAP3AQ9UFN0 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
NIPSNAP3AQ9UFN0 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NIPSNAP3AQ9UFN0 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NIPSNAP3AQ9UFN0 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
NIPSNAP3AQ9UFN0 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NIPSNAP3AQ9UFN0 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NIPSNAP3AQ9UFN0 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NIPSNAP3AQ9UFN0 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NIPSNAP3AQ9UFN0 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
NIPSNAP3AQ9UFN0 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NIPSNAP3AQ9UFN0 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NIPSNAP3AQ9UFN0 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
NIPSNAP3AQ9UFN0 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.9■□□□□ 0.3
NIPSNAP3AQ9UFN0 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.9■□□□□ 0.3
NIPSNAP3AQ9UFN0 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.9■□□□□ 0.3
NIPSNAP3AQ9UFN0 LINC01451-201ENST00000623792 534 ntBASIC16.9■□□□□ 0.3
NIPSNAP3AQ9UFN0 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
NIPSNAP3AQ9UFN0 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.9■□□□□ 0.3
NIPSNAP3AQ9UFN0 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
NIPSNAP3AQ9UFN0 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NIPSNAP3AQ9UFN0 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.9■□□□□ 0.3
NIPSNAP3AQ9UFN0 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NIPSNAP3AQ9UFN0 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
NIPSNAP3AQ9UFN0 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NIPSNAP3AQ9UFN0 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
NIPSNAP3AQ9UFN0 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.9■□□□□ 0.3
NIPSNAP3AQ9UFN0 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NIPSNAP3AQ9UFN0 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NIPSNAP3AQ9UFN0 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.9■□□□□ 0.3
NIPSNAP3AQ9UFN0 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NIPSNAP3AQ9UFN0 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NIPSNAP3AQ9UFN0 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NIPSNAP3AQ9UFN0 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
NIPSNAP3AQ9UFN0 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NIPSNAP3AQ9UFN0 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.89■□□□□ 0.3
NIPSNAP3AQ9UFN0 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
NIPSNAP3AQ9UFN0 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
NIPSNAP3AQ9UFN0 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
NIPSNAP3AQ9UFN0 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
NIPSNAP3AQ9UFN0 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
NIPSNAP3AQ9UFN0 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
NIPSNAP3AQ9UFN0 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NIPSNAP3AQ9UFN0 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.89■□□□□ 0.29
NIPSNAP3AQ9UFN0 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NIPSNAP3AQ9UFN0 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NIPSNAP3AQ9UFN0 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NIPSNAP3AQ9UFN0 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NIPSNAP3AQ9UFN0 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
NIPSNAP3AQ9UFN0 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NIPSNAP3AQ9UFN0 TSPY14P-201ENST00000303979 915 ntBASIC16.89■□□□□ 0.29
NIPSNAP3AQ9UFN0 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NIPSNAP3AQ9UFN0 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NIPSNAP3AQ9UFN0 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NIPSNAP3AQ9UFN0 MIR718-201ENST00000390190 70 ntBASIC16.89■□□□□ 0.29
NIPSNAP3AQ9UFN0 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
NIPSNAP3AQ9UFN0 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.89■□□□□ 0.29
NIPSNAP3AQ9UFN0 MIR3917-201ENST00000580971 93 ntBASIC16.89■□□□□ 0.29
NIPSNAP3AQ9UFN0 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.89■□□□□ 0.29
NIPSNAP3AQ9UFN0 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
NIPSNAP3AQ9UFN0 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NIPSNAP3AQ9UFN0 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.89■□□□□ 0.29
NIPSNAP3AQ9UFN0 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
NIPSNAP3AQ9UFN0 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NIPSNAP3AQ9UFN0 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.89■□□□□ 0.29
NIPSNAP3AQ9UFN0 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NIPSNAP3AQ9UFN0 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.89■□□□□ 0.29
NIPSNAP3AQ9UFN0 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms