Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TLR9Q9NR96 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TLR9Q9NR96 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
TLR9Q9NR96 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TLR9Q9NR96 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TLR9Q9NR96 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TLR9Q9NR96 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TLR9Q9NR96 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.66■□□□□ 0.58
TLR9Q9NR96 AL035633.1-201ENST00000406139 838 ntBASIC18.66■□□□□ 0.58
TLR9Q9NR96 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.66■□□□□ 0.58
TLR9Q9NR96 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.66■□□□□ 0.58
TLR9Q9NR96 PDPK2P-202ENST00000562415 1191 ntBASIC18.66■□□□□ 0.58
TLR9Q9NR96 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.66■□□□□ 0.58
TLR9Q9NR96 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.66■□□□□ 0.58
TLR9Q9NR96 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.66■□□□□ 0.58
TLR9Q9NR96 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
TLR9Q9NR96 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TLR9Q9NR96 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TLR9Q9NR96 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.66■□□□□ 0.58
TLR9Q9NR96 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
TLR9Q9NR96 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TLR9Q9NR96 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TLR9Q9NR96 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
TLR9Q9NR96 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.65■□□□□ 0.58
TLR9Q9NR96 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
TLR9Q9NR96 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.65■□□□□ 0.58
TLR9Q9NR96 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TLR9Q9NR96 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
TLR9Q9NR96 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TLR9Q9NR96 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TLR9Q9NR96 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.65■□□□□ 0.58
TLR9Q9NR96 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.65■□□□□ 0.58
TLR9Q9NR96 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.65■□□□□ 0.58
TLR9Q9NR96 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.65■□□□□ 0.58
TLR9Q9NR96 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.65■□□□□ 0.58
TLR9Q9NR96 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.65■□□□□ 0.58
TLR9Q9NR96 AC019129.2-201ENST00000609837 1235 ntBASIC18.65■□□□□ 0.58
TLR9Q9NR96 AC004877.2-201ENST00000623941 599 ntBASIC18.65■□□□□ 0.58
TLR9Q9NR96 AC010507.1-201ENST00000633895 436 ntBASIC18.65■□□□□ 0.58
TLR9Q9NR96 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.65■□□□□ 0.58
TLR9Q9NR96 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TLR9Q9NR96 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.65■□□□□ 0.58
TLR9Q9NR96 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.64■□□□□ 0.58
TLR9Q9NR96 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TLR9Q9NR96 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TLR9Q9NR96 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TLR9Q9NR96 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TLR9Q9NR96 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TLR9Q9NR96 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.64■□□□□ 0.57
TLR9Q9NR96 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TLR9Q9NR96 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.64■□□□□ 0.57
TLR9Q9NR96 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.64■□□□□ 0.57
TLR9Q9NR96 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.64■□□□□ 0.57
TLR9Q9NR96 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.64■□□□□ 0.57
TLR9Q9NR96 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.64■□□□□ 0.57
TLR9Q9NR96 AC096734.2-201ENST00000562054 433 ntBASIC18.64■□□□□ 0.57
TLR9Q9NR96 AC106028.4-201ENST00000614509 607 ntBASIC18.64■□□□□ 0.57
TLR9Q9NR96 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.64■□□□□ 0.57
TLR9Q9NR96 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TLR9Q9NR96 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TLR9Q9NR96 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.64■□□□□ 0.57
TLR9Q9NR96 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TLR9Q9NR96 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TLR9Q9NR96 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TLR9Q9NR96 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TLR9Q9NR96 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TLR9Q9NR96 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TLR9Q9NR96 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TLR9Q9NR96 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TLR9Q9NR96 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TLR9Q9NR96 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TLR9Q9NR96 AL031598.1-201ENST00000561511 1773 ntBASIC18.63■□□□□ 0.57
TLR9Q9NR96 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TLR9Q9NR96 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.63■□□□□ 0.57
TLR9Q9NR96 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
TLR9Q9NR96 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TLR9Q9NR96 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TLR9Q9NR96 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TLR9Q9NR96 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TLR9Q9NR96 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TLR9Q9NR96 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TLR9Q9NR96 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.63■□□□□ 0.57
TLR9Q9NR96 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.63■□□□□ 0.57
TLR9Q9NR96 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.63■□□□□ 0.57
TLR9Q9NR96 STK19B-204ENST00000512515 211 ntBASIC18.63■□□□□ 0.57
TLR9Q9NR96 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
TLR9Q9NR96 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.63■□□□□ 0.57
TLR9Q9NR96 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
TLR9Q9NR96 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.63■□□□□ 0.57
TLR9Q9NR96 AL031432.2-201ENST00000566714 459 ntBASIC18.63■□□□□ 0.57
TLR9Q9NR96 AL928711.1-201ENST00000570165 459 ntBASIC18.63■□□□□ 0.57
TLR9Q9NR96 AC109462.3-201ENST00000573934 613 ntBASIC18.63■□□□□ 0.57
TLR9Q9NR96 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
TLR9Q9NR96 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TLR9Q9NR96 BCAR1-209ENST00000546196 1340 ntBASIC18.63■□□□□ 0.57
TLR9Q9NR96 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.63■□□□□ 0.57
TLR9Q9NR96 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
TLR9Q9NR96 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TLR9Q9NR96 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TLR9Q9NR96 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms