Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HMG20AQ9NP66 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMG20AQ9NP66 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMG20AQ9NP66 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.11■□□□□ 0.17
HMG20AQ9NP66 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMG20AQ9NP66 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.11■□□□□ 0.17
HMG20AQ9NP66 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
HMG20AQ9NP66 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
HMG20AQ9NP66 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMG20AQ9NP66 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
HMG20AQ9NP66 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMG20AQ9NP66 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMG20AQ9NP66 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HMG20AQ9NP66 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.11■□□□□ 0.17
HMG20AQ9NP66 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMG20AQ9NP66 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
HMG20AQ9NP66 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMG20AQ9NP66 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HMG20AQ9NP66 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.11■□□□□ 0.17
HMG20AQ9NP66 TSPY23P-201ENST00000440136 739 ntBASIC16.11■□□□□ 0.17
HMG20AQ9NP66 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMG20AQ9NP66 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.11■□□□□ 0.17
HMG20AQ9NP66 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.11■□□□□ 0.17
HMG20AQ9NP66 CD99P1-205ENST00000527459 561 ntBASIC16.11■□□□□ 0.17
HMG20AQ9NP66 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.11■□□□□ 0.17
HMG20AQ9NP66 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.11■□□□□ 0.17
HMG20AQ9NP66 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.11■□□□□ 0.17
HMG20AQ9NP66 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMG20AQ9NP66 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.11■□□□□ 0.17
HMG20AQ9NP66 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.11■□□□□ 0.17
HMG20AQ9NP66 AC133963.1-201ENST00000504166 1679 ntBASIC16.11■□□□□ 0.17
HMG20AQ9NP66 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMG20AQ9NP66 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMG20AQ9NP66 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
HMG20AQ9NP66 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
HMG20AQ9NP66 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
HMG20AQ9NP66 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMG20AQ9NP66 KRT8P41-201ENST00000533985 1514 ntBASIC16.1■□□□□ 0.17
HMG20AQ9NP66 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.1■□□□□ 0.17
HMG20AQ9NP66 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMG20AQ9NP66 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HMG20AQ9NP66 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMG20AQ9NP66 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
HMG20AQ9NP66 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMG20AQ9NP66 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
HMG20AQ9NP66 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
HMG20AQ9NP66 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMG20AQ9NP66 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMG20AQ9NP66 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
HMG20AQ9NP66 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HMG20AQ9NP66 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.1■□□□□ 0.17
HMG20AQ9NP66 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
HMG20AQ9NP66 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.1■□□□□ 0.17
HMG20AQ9NP66 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
HMG20AQ9NP66 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.1■□□□□ 0.17
HMG20AQ9NP66 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMG20AQ9NP66 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.1■□□□□ 0.17
HMG20AQ9NP66 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.1■□□□□ 0.17
HMG20AQ9NP66 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.1■□□□□ 0.17
HMG20AQ9NP66 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.1■□□□□ 0.17
HMG20AQ9NP66 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.1■□□□□ 0.17
HMG20AQ9NP66 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.1■□□□□ 0.17
HMG20AQ9NP66 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
HMG20AQ9NP66 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.1■□□□□ 0.17
HMG20AQ9NP66 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.1■□□□□ 0.17
HMG20AQ9NP66 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMG20AQ9NP66 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMG20AQ9NP66 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
HMG20AQ9NP66 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMG20AQ9NP66 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.1■□□□□ 0.17
HMG20AQ9NP66 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMG20AQ9NP66 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HMG20AQ9NP66 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMG20AQ9NP66 AC007950.2-201ENST00000615045 2347 ntBASIC16.1■□□□□ 0.17
HMG20AQ9NP66 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
HMG20AQ9NP66 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMG20AQ9NP66 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMG20AQ9NP66 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMG20AQ9NP66 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HMG20AQ9NP66 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.09■□□□□ 0.17
HMG20AQ9NP66 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
HMG20AQ9NP66 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMG20AQ9NP66 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HMG20AQ9NP66 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HMG20AQ9NP66 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HMG20AQ9NP66 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMG20AQ9NP66 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HMG20AQ9NP66 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HMG20AQ9NP66 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMG20AQ9NP66 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMG20AQ9NP66 AC128676.1-201ENST00000454392 318 ntBASIC16.09■□□□□ 0.17
HMG20AQ9NP66 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.09■□□□□ 0.17
HMG20AQ9NP66 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMG20AQ9NP66 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.09■□□□□ 0.17
HMG20AQ9NP66 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.09■□□□□ 0.17
HMG20AQ9NP66 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.09■□□□□ 0.17
HMG20AQ9NP66 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HMG20AQ9NP66 AL445675.2-201ENST00000620291 557 ntBASIC16.09■□□□□ 0.17
HMG20AQ9NP66 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
HMG20AQ9NP66 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms