Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRTM1Q9HBL6 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRTM1Q9HBL6 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.01■□□□□ 0.31
LRTM1Q9HBL6 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRTM1Q9HBL6 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRTM1Q9HBL6 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRTM1Q9HBL6 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
LRTM1Q9HBL6 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.01■□□□□ 0.31
LRTM1Q9HBL6 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRTM1Q9HBL6 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRTM1Q9HBL6 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.01■□□□□ 0.31
LRTM1Q9HBL6 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.01■□□□□ 0.31
LRTM1Q9HBL6 AC117947.1-201ENST00000427448 529 ntBASIC17.01■□□□□ 0.31
LRTM1Q9HBL6 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRTM1Q9HBL6 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.01■□□□□ 0.31
LRTM1Q9HBL6 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.01■□□□□ 0.31
LRTM1Q9HBL6 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.01■□□□□ 0.31
LRTM1Q9HBL6 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRTM1Q9HBL6 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRTM1Q9HBL6 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.01■□□□□ 0.31
LRTM1Q9HBL6 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRTM1Q9HBL6 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRTM1Q9HBL6 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRTM1Q9HBL6 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRTM1Q9HBL6 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRTM1Q9HBL6 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRTM1Q9HBL6 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.01■□□□□ 0.31
LRTM1Q9HBL6 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
LRTM1Q9HBL6 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRTM1Q9HBL6 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRTM1Q9HBL6 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
LRTM1Q9HBL6 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
LRTM1Q9HBL6 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRTM1Q9HBL6 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRTM1Q9HBL6 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.01■□□□□ 0.31
LRTM1Q9HBL6 AL353692.3-201ENST00000407031 1396 ntBASIC17.01■□□□□ 0.31
LRTM1Q9HBL6 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
LRTM1Q9HBL6 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRTM1Q9HBL6 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRTM1Q9HBL6 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRTM1Q9HBL6 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRTM1Q9HBL6 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRTM1Q9HBL6 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRTM1Q9HBL6 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRTM1Q9HBL6 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17■□□□□ 0.31
LRTM1Q9HBL6 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17■□□□□ 0.31
LRTM1Q9HBL6 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRTM1Q9HBL6 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRTM1Q9HBL6 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRTM1Q9HBL6 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRTM1Q9HBL6 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRTM1Q9HBL6 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRTM1Q9HBL6 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17■□□□□ 0.31
LRTM1Q9HBL6 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
LRTM1Q9HBL6 MIR662-201ENST00000384847 95 ntBASIC17■□□□□ 0.31
LRTM1Q9HBL6 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRTM1Q9HBL6 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17■□□□□ 0.31
LRTM1Q9HBL6 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
LRTM1Q9HBL6 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17■□□□□ 0.31
LRTM1Q9HBL6 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17■□□□□ 0.31
LRTM1Q9HBL6 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17■□□□□ 0.31
LRTM1Q9HBL6 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17■□□□□ 0.31
LRTM1Q9HBL6 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17■□□□□ 0.31
LRTM1Q9HBL6 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17■□□□□ 0.31
LRTM1Q9HBL6 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
LRTM1Q9HBL6 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17■□□□□ 0.31
LRTM1Q9HBL6 ANKRD20A8P-203ENST00000641373 517 ntBASIC17■□□□□ 0.31
LRTM1Q9HBL6 AD000864.1-201ENST00000624076 2295 ntBASIC17■□□□□ 0.31
LRTM1Q9HBL6 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRTM1Q9HBL6 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRTM1Q9HBL6 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRTM1Q9HBL6 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRTM1Q9HBL6 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRTM1Q9HBL6 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17■□□□□ 0.31
LRTM1Q9HBL6 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRTM1Q9HBL6 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRTM1Q9HBL6 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRTM1Q9HBL6 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
LRTM1Q9HBL6 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRTM1Q9HBL6 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17■□□□□ 0.31
LRTM1Q9HBL6 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRTM1Q9HBL6 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17■□□□□ 0.31
LRTM1Q9HBL6 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
LRTM1Q9HBL6 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRTM1Q9HBL6 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
LRTM1Q9HBL6 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.99■□□□□ 0.31
LRTM1Q9HBL6 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.99■□□□□ 0.31
LRTM1Q9HBL6 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
LRTM1Q9HBL6 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
LRTM1Q9HBL6 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.99■□□□□ 0.31
LRTM1Q9HBL6 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRTM1Q9HBL6 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.99■□□□□ 0.31
LRTM1Q9HBL6 AC073508.3-201ENST00000619697 1419 ntBASIC16.99■□□□□ 0.31
LRTM1Q9HBL6 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRTM1Q9HBL6 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
LRTM1Q9HBL6 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRTM1Q9HBL6 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.99■□□□□ 0.31
LRTM1Q9HBL6 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRTM1Q9HBL6 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.99■□□□□ 0.31
LRTM1Q9HBL6 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms