Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SH2D4AQ9H788 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH2D4AQ9H788 AC132938.5-201ENST00000624980 1813 ntBASIC20.55■□□□□ 0.88
SH2D4AQ9H788 LETM1P2-201ENST00000597330 2178 ntBASIC20.55■□□□□ 0.88
SH2D4AQ9H788 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.55■□□□□ 0.88
SH2D4AQ9H788 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.55■□□□□ 0.88
SH2D4AQ9H788 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.55■□□□□ 0.88
SH2D4AQ9H788 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.55■□□□□ 0.88
SH2D4AQ9H788 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.55■□□□□ 0.88
SH2D4AQ9H788 SIGLEC30P-201ENST00000455569 941 ntBASIC20.55■□□□□ 0.88
SH2D4AQ9H788 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC20.55■□□□□ 0.88
SH2D4AQ9H788 IGHV3-52-201ENST00000519770 353 ntBASIC20.55■□□□□ 0.88
SH2D4AQ9H788 UNC93B6-202ENST00000528242 690 ntBASIC20.55■□□□□ 0.88
SH2D4AQ9H788 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.55■□□□□ 0.88
SH2D4AQ9H788 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SH2D4AQ9H788 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.55■□□□□ 0.88
SH2D4AQ9H788 AC019129.2-201ENST00000609837 1235 ntBASIC20.55■□□□□ 0.88
SH2D4AQ9H788 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH2D4AQ9H788 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH2D4AQ9H788 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH2D4AQ9H788 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SH2D4AQ9H788 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SH2D4AQ9H788 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SH2D4AQ9H788 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.55■□□□□ 0.88
SH2D4AQ9H788 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH2D4AQ9H788 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH2D4AQ9H788 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SH2D4AQ9H788 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH2D4AQ9H788 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH2D4AQ9H788 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH2D4AQ9H788 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH2D4AQ9H788 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.54■□□□□ 0.88
SH2D4AQ9H788 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SH2D4AQ9H788 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SH2D4AQ9H788 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH2D4AQ9H788 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SH2D4AQ9H788 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
SH2D4AQ9H788 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SH2D4AQ9H788 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SH2D4AQ9H788 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.54■□□□□ 0.88
SH2D4AQ9H788 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH2D4AQ9H788 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH2D4AQ9H788 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.54■□□□□ 0.88
SH2D4AQ9H788 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.54■□□□□ 0.88
SH2D4AQ9H788 AC136632.2-201ENST00000512891 861 ntBASIC20.54■□□□□ 0.88
SH2D4AQ9H788 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.54■□□□□ 0.88
SH2D4AQ9H788 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SH2D4AQ9H788 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.54■□□□□ 0.88
SH2D4AQ9H788 AC140113.2-201ENST00000604370 208 ntBASIC20.54■□□□□ 0.88
SH2D4AQ9H788 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SH2D4AQ9H788 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SH2D4AQ9H788 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.54■□□□□ 0.88
SH2D4AQ9H788 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH2D4AQ9H788 AC009949.1-201ENST00000623048 1830 ntBASIC20.54■□□□□ 0.88
SH2D4AQ9H788 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH2D4AQ9H788 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH2D4AQ9H788 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH2D4AQ9H788 AC004817.3-201ENST00000602957 2129 ntBASIC20.54■□□□□ 0.88
SH2D4AQ9H788 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH2D4AQ9H788 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SH2D4AQ9H788 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.54■□□□□ 0.88
SH2D4AQ9H788 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.54■□□□□ 0.88
SH2D4AQ9H788 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH2D4AQ9H788 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SH2D4AQ9H788 AC100803.2-201ENST00000562459 1963 ntBASIC20.54■□□□□ 0.88
SH2D4AQ9H788 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SH2D4AQ9H788 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.53■□□□□ 0.88
SH2D4AQ9H788 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.53■□□□□ 0.88
SH2D4AQ9H788 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SH2D4AQ9H788 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.53■□□□□ 0.88
SH2D4AQ9H788 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SH2D4AQ9H788 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SH2D4AQ9H788 AL390961.4-201ENST00000623958 2535 ntBASIC20.53■□□□□ 0.88
SH2D4AQ9H788 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SH2D4AQ9H788 BX842568.4-201ENST00000421222 227 ntBASIC20.53■□□□□ 0.88
SH2D4AQ9H788 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.53■□□□□ 0.88
SH2D4AQ9H788 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.53■□□□□ 0.88
SH2D4AQ9H788 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.53■□□□□ 0.88
SH2D4AQ9H788 AC092865.5-201ENST00000545435 363 ntBASIC20.53■□□□□ 0.88
SH2D4AQ9H788 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.53■□□□□ 0.88
SH2D4AQ9H788 AC109462.3-201ENST00000573934 613 ntBASIC20.53■□□□□ 0.88
SH2D4AQ9H788 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SH2D4AQ9H788 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.53■□□□□ 0.88
SH2D4AQ9H788 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.53■□□□□ 0.88
SH2D4AQ9H788 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.53■□□□□ 0.88
SH2D4AQ9H788 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.53■□□□□ 0.88
SH2D4AQ9H788 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.53■□□□□ 0.88
SH2D4AQ9H788 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SH2D4AQ9H788 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SH2D4AQ9H788 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SH2D4AQ9H788 REXO1L9P-201ENST00000604264 2108 ntBASIC20.53■□□□□ 0.88
SH2D4AQ9H788 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SH2D4AQ9H788 NCF1C-201ENST00000438382 1427 ntBASIC20.53■□□□□ 0.88
SH2D4AQ9H788 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
SH2D4AQ9H788 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.52■□□□□ 0.88
SH2D4AQ9H788 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
SH2D4AQ9H788 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.52■□□□□ 0.88
SH2D4AQ9H788 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
SH2D4AQ9H788 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.52■□□□□ 0.88
SH2D4AQ9H788 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms