Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
CCSER1Q9C0I3 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.75■□□□□ 0.75
CCSER1Q9C0I3 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
CCSER1Q9C0I3 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
CCSER1Q9C0I3 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCSER1Q9C0I3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCSER1Q9C0I3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCSER1Q9C0I3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.75■□□□□ 0.75
CCSER1Q9C0I3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCSER1Q9C0I3 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCSER1Q9C0I3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCSER1Q9C0I3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCSER1Q9C0I3 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCSER1Q9C0I3 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.74■□□□□ 0.75
CCSER1Q9C0I3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCSER1Q9C0I3 TP73-AS1-210ENST00000637775 1455 ntBASIC19.74■□□□□ 0.75
CCSER1Q9C0I3 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CCSER1Q9C0I3 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCSER1Q9C0I3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.74■□□□□ 0.75
CCSER1Q9C0I3 LINC00265-3P-201ENST00000447588 903 ntBASIC19.74■□□□□ 0.75
CCSER1Q9C0I3 IGHV3-52-201ENST00000519770 353 ntBASIC19.74■□□□□ 0.75
CCSER1Q9C0I3 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.74■□□□□ 0.75
CCSER1Q9C0I3 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCSER1Q9C0I3 BNIP3P18-201ENST00000593976 575 ntBASIC19.74■□□□□ 0.75
CCSER1Q9C0I3 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.74■□□□□ 0.75
CCSER1Q9C0I3 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CCSER1Q9C0I3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCSER1Q9C0I3 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCSER1Q9C0I3 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCSER1Q9C0I3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCSER1Q9C0I3 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCSER1Q9C0I3 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.74■□□□□ 0.75
CCSER1Q9C0I3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCSER1Q9C0I3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
CCSER1Q9C0I3 AL353593.2-201ENST00000602529 1483 ntBASIC19.73■□□□□ 0.75
CCSER1Q9C0I3 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCSER1Q9C0I3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.73■□□□□ 0.75
CCSER1Q9C0I3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCSER1Q9C0I3 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCSER1Q9C0I3 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCSER1Q9C0I3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.73■□□□□ 0.75
CCSER1Q9C0I3 NSUN5P1-202ENST00000421140 1535 ntBASIC19.73■□□□□ 0.75
CCSER1Q9C0I3 NSUN5P2-203ENST00000457352 1529 ntBASIC19.73■□□□□ 0.75
CCSER1Q9C0I3 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.73■□□□□ 0.75
CCSER1Q9C0I3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCSER1Q9C0I3 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCSER1Q9C0I3 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCSER1Q9C0I3 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCSER1Q9C0I3 UPK3BP1-201ENST00000428678 509 ntBASIC19.73■□□□□ 0.75
CCSER1Q9C0I3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCSER1Q9C0I3 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
CCSER1Q9C0I3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.73■□□□□ 0.75
CCSER1Q9C0I3 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.73■□□□□ 0.75
CCSER1Q9C0I3 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.73■□□□□ 0.75
CCSER1Q9C0I3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CCSER1Q9C0I3 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CCSER1Q9C0I3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.73■□□□□ 0.75
CCSER1Q9C0I3 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.73■□□□□ 0.75
CCSER1Q9C0I3 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.73■□□□□ 0.75
CCSER1Q9C0I3 KRT8P10-201ENST00000450021 1447 ntBASIC19.73■□□□□ 0.75
CCSER1Q9C0I3 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCSER1Q9C0I3 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCSER1Q9C0I3 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCSER1Q9C0I3 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CCSER1Q9C0I3 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CCSER1Q9C0I3 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCSER1Q9C0I3 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.73■□□□□ 0.75
CCSER1Q9C0I3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.72■□□□□ 0.75
CCSER1Q9C0I3 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCSER1Q9C0I3 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCSER1Q9C0I3 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCSER1Q9C0I3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCSER1Q9C0I3 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.72■□□□□ 0.75
CCSER1Q9C0I3 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCSER1Q9C0I3 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCSER1Q9C0I3 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCSER1Q9C0I3 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCSER1Q9C0I3 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.72■□□□□ 0.75
CCSER1Q9C0I3 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCSER1Q9C0I3 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
CCSER1Q9C0I3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCSER1Q9C0I3 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCSER1Q9C0I3 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
CCSER1Q9C0I3 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
CCSER1Q9C0I3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCSER1Q9C0I3 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.72■□□□□ 0.75
CCSER1Q9C0I3 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CCSER1Q9C0I3 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.72■□□□□ 0.75
CCSER1Q9C0I3 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.72■□□□□ 0.75
CCSER1Q9C0I3 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.72■□□□□ 0.75
CCSER1Q9C0I3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCSER1Q9C0I3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCSER1Q9C0I3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CCSER1Q9C0I3 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCSER1Q9C0I3 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
CCSER1Q9C0I3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCSER1Q9C0I3 INTS4P1-201ENST00000438455 1935 ntBASIC19.72■□□□□ 0.75
CCSER1Q9C0I3 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCSER1Q9C0I3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCSER1Q9C0I3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms