Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC6□□□□□ -1.45
KRTAP4-3Q9BYR4 BICD1-207ENST00000551848 1962 ntBASIC6□□□□□ -1.45
KRTAP4-3Q9BYR4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
KRTAP4-3Q9BYR4 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
KRTAP4-3Q9BYR4 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
KRTAP4-3Q9BYR4 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
KRTAP4-3Q9BYR4 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
KRTAP4-3Q9BYR4 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
KRTAP4-3Q9BYR4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
KRTAP4-3Q9BYR4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
KRTAP4-3Q9BYR4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
KRTAP4-3Q9BYR4 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
KRTAP4-3Q9BYR4 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
KRTAP4-3Q9BYR4 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 AC006504.4-201ENST00000592118 1568 ntBASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 AL049757.1-201ENST00000616842 1596 ntBASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 FAM220CP-201ENST00000395253 831 ntBASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 RBM17P3-201ENST00000417687 1192 ntBASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 AC023274.1-201ENST00000418278 595 ntBASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 KRT18P2-201ENST00000447938 1258 ntBASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 PON3-205ENST00000451904 1053 ntTSL 3 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 SCARNA2-201ENST00000458748 420 ntBASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 UNC93B6-202ENST00000528242 690 ntBASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 PIN1-206ENST00000587625 878 ntTSL 2 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 AL356488.2-201ENST00000602755 427 ntBASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 AC140113.2-201ENST00000604370 208 ntBASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 AC006538.3-201ENST00000612495 578 ntBASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
KRTAP4-3Q9BYR4 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms