Protein–RNA interactions for Protein: Q9BW85

CCDC94, Coiled-coil domain-containing protein 94, humanhuman

Predicted RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC94Q9BW85 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC94Q9BW85 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC94Q9BW85 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC94Q9BW85 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC94Q9BW85 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC94Q9BW85 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC94Q9BW85 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC94Q9BW85 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CCDC94Q9BW85 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.05■□□□□ 0.8
CCDC94Q9BW85 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.05■□□□□ 0.8
CCDC94Q9BW85 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.05■□□□□ 0.8
CCDC94Q9BW85 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC94Q9BW85 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC94Q9BW85 AL163051.1-201ENST00000569214 1512 ntBASIC20.05■□□□□ 0.8
CCDC94Q9BW85 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC94Q9BW85 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC94Q9BW85 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CCDC94Q9BW85 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC94Q9BW85 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC94Q9BW85 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC94Q9BW85 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC94Q9BW85 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC94Q9BW85 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC94Q9BW85 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC94Q9BW85 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC94Q9BW85 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CCDC94Q9BW85 LINC00554-201ENST00000564841 3011 ntBASIC20.04■□□□□ 0.8
CCDC94Q9BW85 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC94Q9BW85 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC94Q9BW85 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CCDC94Q9BW85 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC94Q9BW85 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC94Q9BW85 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC94Q9BW85 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.04■□□□□ 0.8
CCDC94Q9BW85 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC94Q9BW85 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC94Q9BW85 ABR-203ENST00000536794 2213 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC94Q9BW85 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC94Q9BW85 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CCDC94Q9BW85 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC94Q9BW85 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC94Q9BW85 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CCDC94Q9BW85 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC94Q9BW85 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC94Q9BW85 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC94Q9BW85 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC94Q9BW85 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC94Q9BW85 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC94Q9BW85 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC94Q9BW85 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CCDC94Q9BW85 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC94Q9BW85 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC94Q9BW85 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC94Q9BW85 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC94Q9BW85 MIR662-201ENST00000384847 95 ntBASIC20.03■□□□□ 0.8
CCDC94Q9BW85 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC94Q9BW85 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC94Q9BW85 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.03■□□□□ 0.8
CCDC94Q9BW85 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC94Q9BW85 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC94Q9BW85 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.03■□□□□ 0.8
CCDC94Q9BW85 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC94Q9BW85 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC94Q9BW85 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
CCDC94Q9BW85 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC94Q9BW85 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC94Q9BW85 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC94Q9BW85 PP12613-201ENST00000424958 2230 ntBASIC20.03■□□□□ 0.8
CCDC94Q9BW85 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC94Q9BW85 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC94Q9BW85 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC94Q9BW85 PCDHA1-201ENST00000378133 2726 ntBASIC20.03■□□□□ 0.8
CCDC94Q9BW85 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC94Q9BW85 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC94Q9BW85 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC94Q9BW85 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CCDC94Q9BW85 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC94Q9BW85 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CCDC94Q9BW85 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.02■□□□□ 0.8
CCDC94Q9BW85 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC94Q9BW85 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CCDC94Q9BW85 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC94Q9BW85 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC94Q9BW85 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CCDC94Q9BW85 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC94Q9BW85 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
CCDC94Q9BW85 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC94Q9BW85 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC94Q9BW85 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.02■□□□□ 0.8
CCDC94Q9BW85 AC069148.1-201ENST00000608741 768 ntBASIC20.02■□□□□ 0.8
CCDC94Q9BW85 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.02■□□□□ 0.8
CCDC94Q9BW85 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC94Q9BW85 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC94Q9BW85 MYLKP1-201ENST00000509077 1580 ntBASIC20.02■□□□□ 0.8
CCDC94Q9BW85 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC94Q9BW85 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC94Q9BW85 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC94Q9BW85 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC94Q9BW85 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC94Q9BW85 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms