Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 AC138894.3-201ENST00000603787 634 ntBASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 AL139384.1-201ENST00000612143 3047 ntBASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 PCDHA12-202ENST00000613593 2588 ntBASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 ESPNP-201ENST00000270691 2015 ntBASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 MINOS1P3-201ENST00000457048 203 ntBASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 FOSL1P1-201ENST00000511041 816 ntBASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 AC099336.1-202ENST00000602961 463 ntBASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 POR-209ENST00000439269 1858 ntTSL 2 BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC14.84□□□□□ -0.03
PCGF1Q9BSM1 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.83□□□□□ -0.03
PCGF1Q9BSM1 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCGF1Q9BSM1 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCGF1Q9BSM1 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC14.83□□□□□ -0.03
PCGF1Q9BSM1 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCGF1Q9BSM1 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCGF1Q9BSM1 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCGF1Q9BSM1 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCGF1Q9BSM1 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCGF1Q9BSM1 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC14.83□□□□□ -0.04
PCGF1Q9BSM1 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCGF1Q9BSM1 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCGF1Q9BSM1 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC14.83□□□□□ -0.04
PCGF1Q9BSM1 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCGF1Q9BSM1 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCGF1Q9BSM1 FLYWCH1P1-201ENST00000460917 1874 ntBASIC14.83□□□□□ -0.04
PCGF1Q9BSM1 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
PCGF1Q9BSM1 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
PCGF1Q9BSM1 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCGF1Q9BSM1 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.83□□□□□ -0.04
PCGF1Q9BSM1 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCGF1Q9BSM1 SLC25A6P5-201ENST00000435663 894 ntBASIC14.83□□□□□ -0.04
PCGF1Q9BSM1 NUS1P1-201ENST00000446295 882 ntBASIC14.83□□□□□ -0.04
PCGF1Q9BSM1 KRT17P6-201ENST00000453795 1220 ntBASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms