Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
HDHD3Q9BSH5 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
HDHD3Q9BSH5 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC14.94□□□□□ -0.02
HDHD3Q9BSH5 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
HDHD3Q9BSH5 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HDHD3Q9BSH5 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
HDHD3Q9BSH5 MED29-202ENST00000594368 1471 ntTSL 2 BASIC14.94□□□□□ -0.02
HDHD3Q9BSH5 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HDHD3Q9BSH5 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HDHD3Q9BSH5 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HDHD3Q9BSH5 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
HDHD3Q9BSH5 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HDHD3Q9BSH5 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HDHD3Q9BSH5 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HDHD3Q9BSH5 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HDHD3Q9BSH5 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
HDHD3Q9BSH5 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
HDHD3Q9BSH5 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HDHD3Q9BSH5 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HDHD3Q9BSH5 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HDHD3Q9BSH5 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HDHD3Q9BSH5 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.93□□□□□ -0.02
HDHD3Q9BSH5 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.93□□□□□ -0.02
HDHD3Q9BSH5 AC106886.4-201ENST00000623557 2502 ntBASIC14.93□□□□□ -0.02
HDHD3Q9BSH5 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HDHD3Q9BSH5 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HDHD3Q9BSH5 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HDHD3Q9BSH5 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.93□□□□□ -0.02
HDHD3Q9BSH5 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HDHD3Q9BSH5 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
HDHD3Q9BSH5 MMP23A-201ENST00000234610 1017 ntBASIC14.93□□□□□ -0.02
HDHD3Q9BSH5 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HDHD3Q9BSH5 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
HDHD3Q9BSH5 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
HDHD3Q9BSH5 ECEL1P3-201ENST00000427961 737 ntBASIC14.93□□□□□ -0.02
HDHD3Q9BSH5 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC14.93□□□□□ -0.02
HDHD3Q9BSH5 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HDHD3Q9BSH5 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC14.93□□□□□ -0.02
HDHD3Q9BSH5 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.93□□□□□ -0.02
HDHD3Q9BSH5 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.93□□□□□ -0.02
HDHD3Q9BSH5 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC14.93□□□□□ -0.02
HDHD3Q9BSH5 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HDHD3Q9BSH5 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
HDHD3Q9BSH5 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
HDHD3Q9BSH5 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
HDHD3Q9BSH5 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.93□□□□□ -0.02
HDHD3Q9BSH5 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HDHD3Q9BSH5 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
HDHD3Q9BSH5 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
HDHD3Q9BSH5 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HDHD3Q9BSH5 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC14.93□□□□□ -0.02
HDHD3Q9BSH5 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
HDHD3Q9BSH5 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HDHD3Q9BSH5 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
HDHD3Q9BSH5 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HDHD3Q9BSH5 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HDHD3Q9BSH5 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC14.92□□□□□ -0.02
HDHD3Q9BSH5 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
HDHD3Q9BSH5 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HDHD3Q9BSH5 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HDHD3Q9BSH5 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
HDHD3Q9BSH5 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HDHD3Q9BSH5 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
HDHD3Q9BSH5 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HDHD3Q9BSH5 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.92□□□□□ -0.02
HDHD3Q9BSH5 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.92□□□□□ -0.02
HDHD3Q9BSH5 CRAT-202ENST00000393384 973 ntTSL 2 BASIC14.92□□□□□ -0.02
HDHD3Q9BSH5 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC14.92□□□□□ -0.02
HDHD3Q9BSH5 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC14.92□□□□□ -0.02
HDHD3Q9BSH5 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC14.92□□□□□ -0.02
HDHD3Q9BSH5 KRT18P65-201ENST00000439811 1286 ntBASIC14.92□□□□□ -0.02
HDHD3Q9BSH5 DDX43P3-201ENST00000441064 443 ntBASIC14.92□□□□□ -0.02
HDHD3Q9BSH5 AC113404.2-201ENST00000507884 177 ntBASIC14.92□□□□□ -0.02
HDHD3Q9BSH5 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HDHD3Q9BSH5 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC14.92□□□□□ -0.02
HDHD3Q9BSH5 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC14.92□□□□□ -0.02
HDHD3Q9BSH5 GCSHP2-201ENST00000560971 527 ntBASIC14.92□□□□□ -0.02
HDHD3Q9BSH5 AL512604.3-201ENST00000569583 964 ntBASIC14.92□□□□□ -0.02
HDHD3Q9BSH5 MIR4497-201ENST00000583208 89 ntBASIC14.92□□□□□ -0.02
HDHD3Q9BSH5 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC14.92□□□□□ -0.02
HDHD3Q9BSH5 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC14.92□□□□□ -0.02
HDHD3Q9BSH5 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
HDHD3Q9BSH5 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC14.92□□□□□ -0.02
HDHD3Q9BSH5 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HDHD3Q9BSH5 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC14.92□□□□□ -0.02
HDHD3Q9BSH5 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HDHD3Q9BSH5 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.92□□□□□ -0.02
HDHD3Q9BSH5 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HDHD3Q9BSH5 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
HDHD3Q9BSH5 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
HDHD3Q9BSH5 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HDHD3Q9BSH5 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HDHD3Q9BSH5 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HDHD3Q9BSH5 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HDHD3Q9BSH5 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HDHD3Q9BSH5 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HDHD3Q9BSH5 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC14.92□□□□□ -0.02
HDHD3Q9BSH5 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
HDHD3Q9BSH5 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HDHD3Q9BSH5 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms