Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC38A3Q99624 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC38A3Q99624 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC38A3Q99624 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC38A3Q99624 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC38A3Q99624 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SLC38A3Q99624 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.12■□□□□ 0.33
SLC38A3Q99624 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SLC38A3Q99624 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.11■□□□□ 0.33
SLC38A3Q99624 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC38A3Q99624 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC38A3Q99624 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC38A3Q99624 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC38A3Q99624 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SLC38A3Q99624 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC38A3Q99624 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC38A3Q99624 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC38A3Q99624 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC38A3Q99624 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SLC38A3Q99624 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC38A3Q99624 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC38A3Q99624 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SLC38A3Q99624 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC38A3Q99624 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC38A3Q99624 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SLC38A3Q99624 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SLC38A3Q99624 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SLC38A3Q99624 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC38A3Q99624 SLC25A1P1-201ENST00000528351 927 ntBASIC17.11■□□□□ 0.33
SLC38A3Q99624 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC38A3Q99624 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC38A3Q99624 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.11■□□□□ 0.33
SLC38A3Q99624 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.11■□□□□ 0.33
SLC38A3Q99624 AC025062.2-201ENST00000605477 670 ntBASIC17.11■□□□□ 0.33
SLC38A3Q99624 AC073592.5-201ENST00000624854 528 ntBASIC17.11■□□□□ 0.33
SLC38A3Q99624 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC38A3Q99624 AL022326.1-202ENST00000641533 845 ntBASIC17.11■□□□□ 0.33
SLC38A3Q99624 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC38A3Q99624 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SLC38A3Q99624 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC38A3Q99624 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC38A3Q99624 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC38A3Q99624 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC38A3Q99624 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC38A3Q99624 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC38A3Q99624 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC38A3Q99624 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC38A3Q99624 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC38A3Q99624 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC38A3Q99624 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC38A3Q99624 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC38A3Q99624 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC38A3Q99624 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
SLC38A3Q99624 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC38A3Q99624 AC100803.2-201ENST00000562459 1963 ntBASIC17.1■□□□□ 0.33
SLC38A3Q99624 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC38A3Q99624 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC38A3Q99624 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC38A3Q99624 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC38A3Q99624 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC38A3Q99624 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC38A3Q99624 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC38A3Q99624 PMS2P1-201ENST00000431037 1228 ntBASIC17.1■□□□□ 0.33
SLC38A3Q99624 RPL13AP23-201ENST00000480739 586 ntBASIC17.1■□□□□ 0.33
SLC38A3Q99624 AC092910.1-201ENST00000482027 1129 ntBASIC17.1■□□□□ 0.33
SLC38A3Q99624 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC38A3Q99624 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC38A3Q99624 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.1■□□□□ 0.33
SLC38A3Q99624 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC38A3Q99624 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC38A3Q99624 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC38A3Q99624 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC38A3Q99624 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC38A3Q99624 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SLC38A3Q99624 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC38A3Q99624 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC38A3Q99624 ZNF259P1-201ENST00000407656 1365 ntBASIC17.1■□□□□ 0.33
SLC38A3Q99624 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC38A3Q99624 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SLC38A3Q99624 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC38A3Q99624 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
SLC38A3Q99624 NEFHP1-201ENST00000412845 2629 ntBASIC17.1■□□□□ 0.33
SLC38A3Q99624 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC38A3Q99624 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC38A3Q99624 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SLC38A3Q99624 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC38A3Q99624 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC38A3Q99624 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC38A3Q99624 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC38A3Q99624 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC38A3Q99624 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC38A3Q99624 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.09■□□□□ 0.33
SLC38A3Q99624 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC38A3Q99624 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC38A3Q99624 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC38A3Q99624 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC38A3Q99624 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SLC38A3Q99624 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.09■□□□□ 0.33
SLC38A3Q99624 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SLC38A3Q99624 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms