Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PHOX2BQ99453 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PHOX2BQ99453 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
PHOX2BQ99453 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PHOX2BQ99453 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PHOX2BQ99453 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.83■□□□□ 0.44
PHOX2BQ99453 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PHOX2BQ99453 MTCL1P1-201ENST00000446207 792 ntBASIC17.83■□□□□ 0.44
PHOX2BQ99453 ACTG1P14-201ENST00000446382 1122 ntBASIC17.83■□□□□ 0.44
PHOX2BQ99453 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
PHOX2BQ99453 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.83■□□□□ 0.44
PHOX2BQ99453 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
PHOX2BQ99453 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
PHOX2BQ99453 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
PHOX2BQ99453 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.83■□□□□ 0.44
PHOX2BQ99453 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.83■□□□□ 0.44
PHOX2BQ99453 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.83■□□□□ 0.44
PHOX2BQ99453 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PHOX2BQ99453 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
PHOX2BQ99453 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PHOX2BQ99453 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PHOX2BQ99453 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PHOX2BQ99453 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.83■□□□□ 0.44
PHOX2BQ99453 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.83■□□□□ 0.44
PHOX2BQ99453 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
PHOX2BQ99453 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PHOX2BQ99453 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.83■□□□□ 0.44
PHOX2BQ99453 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PHOX2BQ99453 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PHOX2BQ99453 AC007613.1-201ENST00000572811 2597 ntBASIC17.83■□□□□ 0.44
PHOX2BQ99453 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PHOX2BQ99453 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PHOX2BQ99453 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
PHOX2BQ99453 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PHOX2BQ99453 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PHOX2BQ99453 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.82■□□□□ 0.44
PHOX2BQ99453 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.82■□□□□ 0.44
PHOX2BQ99453 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PHOX2BQ99453 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.82■□□□□ 0.44
PHOX2BQ99453 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PHOX2BQ99453 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.82■□□□□ 0.44
PHOX2BQ99453 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PHOX2BQ99453 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PHOX2BQ99453 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.82■□□□□ 0.44
PHOX2BQ99453 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PHOX2BQ99453 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PHOX2BQ99453 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PHOX2BQ99453 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
PHOX2BQ99453 IGLL3P-201ENST00000412472 434 ntBASIC17.82■□□□□ 0.44
PHOX2BQ99453 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.82■□□□□ 0.44
PHOX2BQ99453 BASP1P1-201ENST00000430708 665 ntBASIC17.82■□□□□ 0.44
PHOX2BQ99453 AC055876.3-201ENST00000431496 288 ntBASIC17.82■□□□□ 0.44
PHOX2BQ99453 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.82■□□□□ 0.44
PHOX2BQ99453 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PHOX2BQ99453 CR383656.12-201ENST00000549567 513 ntBASIC17.82■□□□□ 0.44
PHOX2BQ99453 AC138649.4-201ENST00000612222 287 ntBASIC17.82■□□□□ 0.44
PHOX2BQ99453 AC091812.2-201ENST00000619081 385 ntBASIC17.82■□□□□ 0.44
PHOX2BQ99453 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PHOX2BQ99453 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PHOX2BQ99453 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PHOX2BQ99453 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PHOX2BQ99453 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PHOX2BQ99453 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.81■□□□□ 0.44
PHOX2BQ99453 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PHOX2BQ99453 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PHOX2BQ99453 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.81■□□□□ 0.44
PHOX2BQ99453 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PHOX2BQ99453 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.81■□□□□ 0.44
PHOX2BQ99453 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PHOX2BQ99453 AC093503.3-201ENST00000624917 2352 ntBASIC17.81■□□□□ 0.44
PHOX2BQ99453 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PHOX2BQ99453 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PHOX2BQ99453 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PHOX2BQ99453 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PHOX2BQ99453 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PHOX2BQ99453 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.81■□□□□ 0.44
PHOX2BQ99453 AC079776.2-201ENST00000641154 1609 ntBASIC17.81■□□□□ 0.44
PHOX2BQ99453 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PHOX2BQ99453 AC003669.1-201ENST00000334569 611 ntBASIC17.81■□□□□ 0.44
PHOX2BQ99453 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
PHOX2BQ99453 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.81■□□□□ 0.44
PHOX2BQ99453 ARSEP1-201ENST00000420443 635 ntBASIC17.81■□□□□ 0.44
PHOX2BQ99453 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PHOX2BQ99453 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.81■□□□□ 0.44
PHOX2BQ99453 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.81■□□□□ 0.44
PHOX2BQ99453 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.81■□□□□ 0.44
PHOX2BQ99453 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PHOX2BQ99453 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.81■□□□□ 0.44
PHOX2BQ99453 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.81■□□□□ 0.44
PHOX2BQ99453 AC022145.2-201ENST00000598203 171 ntBASIC17.81■□□□□ 0.44
PHOX2BQ99453 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.81■□□□□ 0.44
PHOX2BQ99453 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PHOX2BQ99453 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.81■□□□□ 0.44
PHOX2BQ99453 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.81■□□□□ 0.44
PHOX2BQ99453 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.81■□□□□ 0.44
PHOX2BQ99453 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PHOX2BQ99453 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PHOX2BQ99453 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PHOX2BQ99453 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PHOX2BQ99453 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms