Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CDK5RAP2Q96SN8 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDK5RAP2Q96SN8 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDK5RAP2Q96SN8 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.64■□□□□ 0.9
CDK5RAP2Q96SN8 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC20.64■□□□□ 0.9
CDK5RAP2Q96SN8 AL513190.1-201ENST00000621254 727 ntBASIC20.64■□□□□ 0.9
CDK5RAP2Q96SN8 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
CDK5RAP2Q96SN8 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.9
CDK5RAP2Q96SN8 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDK5RAP2Q96SN8 AL355312.1-201ENST00000407115 2176 ntBASIC20.64■□□□□ 0.89
CDK5RAP2Q96SN8 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDK5RAP2Q96SN8 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.64■□□□□ 0.89
CDK5RAP2Q96SN8 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDK5RAP2Q96SN8 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDK5RAP2Q96SN8 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDK5RAP2Q96SN8 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.64■□□□□ 0.89
CDK5RAP2Q96SN8 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.64■□□□□ 0.89
CDK5RAP2Q96SN8 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC20.64■□□□□ 0.89
CDK5RAP2Q96SN8 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.64■□□□□ 0.89
CDK5RAP2Q96SN8 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDK5RAP2Q96SN8 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDK5RAP2Q96SN8 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
CDK5RAP2Q96SN8 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDK5RAP2Q96SN8 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDK5RAP2Q96SN8 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDK5RAP2Q96SN8 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDK5RAP2Q96SN8 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CDK5RAP2Q96SN8 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CDK5RAP2Q96SN8 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDK5RAP2Q96SN8 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC20.63■□□□□ 0.89
CDK5RAP2Q96SN8 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.63■□□□□ 0.89
CDK5RAP2Q96SN8 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.63■□□□□ 0.89
CDK5RAP2Q96SN8 IGHV3-65-201ENST00000523210 341 ntBASIC20.63■□□□□ 0.89
CDK5RAP2Q96SN8 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDK5RAP2Q96SN8 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CDK5RAP2Q96SN8 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CDK5RAP2Q96SN8 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDK5RAP2Q96SN8 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC20.62■□□□□ 0.89
CDK5RAP2Q96SN8 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDK5RAP2Q96SN8 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDK5RAP2Q96SN8 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC20.62■□□□□ 0.89
CDK5RAP2Q96SN8 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CDK5RAP2Q96SN8 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC20.62■□□□□ 0.89
CDK5RAP2Q96SN8 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC20.62■□□□□ 0.89
CDK5RAP2Q96SN8 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CDK5RAP2Q96SN8 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.62■□□□□ 0.89
CDK5RAP2Q96SN8 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDK5RAP2Q96SN8 AC005593.1-201ENST00000624894 515 ntBASIC20.62■□□□□ 0.89
CDK5RAP2Q96SN8 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDK5RAP2Q96SN8 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDK5RAP2Q96SN8 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDK5RAP2Q96SN8 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CDK5RAP2Q96SN8 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDK5RAP2Q96SN8 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CDK5RAP2Q96SN8 NEFHP1-201ENST00000412845 2629 ntBASIC20.62■□□□□ 0.89
CDK5RAP2Q96SN8 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDK5RAP2Q96SN8 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.62■□□□□ 0.89
CDK5RAP2Q96SN8 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDK5RAP2Q96SN8 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC20.62■□□□□ 0.89
CDK5RAP2Q96SN8 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDK5RAP2Q96SN8 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDK5RAP2Q96SN8 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20.62■□□□□ 0.89
CDK5RAP2Q96SN8 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDK5RAP2Q96SN8 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.62■□□□□ 0.89
CDK5RAP2Q96SN8 LINC00982-205ENST00000420957 435 ntBASIC20.62■□□□□ 0.89
CDK5RAP2Q96SN8 MCCD1P2-201ENST00000423228 335 ntBASIC20.62■□□□□ 0.89
CDK5RAP2Q96SN8 DNAJB3-202ENST00000449667 1266 ntBASIC20.62■□□□□ 0.89
CDK5RAP2Q96SN8 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.62■□□□□ 0.89
CDK5RAP2Q96SN8 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDK5RAP2Q96SN8 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDK5RAP2Q96SN8 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDK5RAP2Q96SN8 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDK5RAP2Q96SN8 CYP51A1P2-201ENST00000419457 1499 ntBASIC20.61■□□□□ 0.89
CDK5RAP2Q96SN8 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDK5RAP2Q96SN8 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CDK5RAP2Q96SN8 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.61■□□□□ 0.89
CDK5RAP2Q96SN8 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDK5RAP2Q96SN8 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC20.61■□□□□ 0.89
CDK5RAP2Q96SN8 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.61■□□□□ 0.89
CDK5RAP2Q96SN8 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDK5RAP2Q96SN8 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
CDK5RAP2Q96SN8 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC20.61■□□□□ 0.89
CDK5RAP2Q96SN8 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDK5RAP2Q96SN8 AC004790.2-201ENST00000623588 572 ntBASIC20.61■□□□□ 0.89
CDK5RAP2Q96SN8 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.61■□□□□ 0.89
CDK5RAP2Q96SN8 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CDK5RAP2Q96SN8 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
CDK5RAP2Q96SN8 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDK5RAP2Q96SN8 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CDK5RAP2Q96SN8 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.6■□□□□ 0.89
CDK5RAP2Q96SN8 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDK5RAP2Q96SN8 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDK5RAP2Q96SN8 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDK5RAP2Q96SN8 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC20.6■□□□□ 0.89
CDK5RAP2Q96SN8 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDK5RAP2Q96SN8 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.6■□□□□ 0.89
CDK5RAP2Q96SN8 AC012317.2-201ENST00000623305 2251 ntBASIC20.6■□□□□ 0.89
CDK5RAP2Q96SN8 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDK5RAP2Q96SN8 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC20.6■□□□□ 0.89
CDK5RAP2Q96SN8 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms