Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CRAMP1Q96RY5 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CRAMP1Q96RY5 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC21.44■■□□□ 1.02
CRAMP1Q96RY5 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC21.44■■□□□ 1.02
CRAMP1Q96RY5 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC21.44■■□□□ 1.02
CRAMP1Q96RY5 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC21.44■■□□□ 1.02
CRAMP1Q96RY5 AC004449.1-201ENST00000564240 433 ntBASIC21.44■■□□□ 1.02
CRAMP1Q96RY5 AC022145.2-201ENST00000598203 171 ntBASIC21.44■■□□□ 1.02
CRAMP1Q96RY5 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC21.44■■□□□ 1.02
CRAMP1Q96RY5 ACTL9-202ENST00000612068 1252 ntBASIC21.44■■□□□ 1.02
CRAMP1Q96RY5 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
CRAMP1Q96RY5 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CRAMP1Q96RY5 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.44■■□□□ 1.02
CRAMP1Q96RY5 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CRAMP1Q96RY5 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.44■■□□□ 1.02
CRAMP1Q96RY5 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.44■■□□□ 1.02
CRAMP1Q96RY5 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CRAMP1Q96RY5 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CRAMP1Q96RY5 AIRN-201ENST00000601203 4374 ntBASIC21.43■■□□□ 1.02
CRAMP1Q96RY5 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CRAMP1Q96RY5 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
CRAMP1Q96RY5 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CRAMP1Q96RY5 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC21.43■■□□□ 1.02
CRAMP1Q96RY5 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CRAMP1Q96RY5 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
CRAMP1Q96RY5 ENSA-206ENST00000361631 725 ntTSL 2 BASIC21.43■■□□□ 1.02
CRAMP1Q96RY5 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CRAMP1Q96RY5 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC21.43■■□□□ 1.02
CRAMP1Q96RY5 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC21.43■■□□□ 1.02
CRAMP1Q96RY5 LSM12-202ENST00000585388 942 ntTSL 3 BASIC21.43■■□□□ 1.02
CRAMP1Q96RY5 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC21.43■■□□□ 1.02
CRAMP1Q96RY5 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CRAMP1Q96RY5 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.43■■□□□ 1.02
CRAMP1Q96RY5 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC21.43■■□□□ 1.02
CRAMP1Q96RY5 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CRAMP1Q96RY5 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.42■■□□□ 1.02
CRAMP1Q96RY5 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
CRAMP1Q96RY5 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CRAMP1Q96RY5 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
CRAMP1Q96RY5 CBR1-202ENST00000399191 838 ntTSL 3 BASIC21.42■■□□□ 1.02
CRAMP1Q96RY5 PAWRP1-201ENST00000451083 565 ntBASIC21.42■■□□□ 1.02
CRAMP1Q96RY5 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC21.42■■□□□ 1.02
CRAMP1Q96RY5 AL096865.1-201ENST00000606796 927 ntBASIC21.42■■□□□ 1.02
CRAMP1Q96RY5 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC21.42■■□□□ 1.02
CRAMP1Q96RY5 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
CRAMP1Q96RY5 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC21.42■■□□□ 1.02
CRAMP1Q96RY5 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CRAMP1Q96RY5 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
CRAMP1Q96RY5 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC21.42■■□□□ 1.02
CRAMP1Q96RY5 AL020996.1-203ENST00000536896 2307 ntBASIC21.41■■□□□ 1.02
CRAMP1Q96RY5 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CRAMP1Q96RY5 AC006116.8-202ENST00000587620 1550 ntBASIC21.41■■□□□ 1.02
CRAMP1Q96RY5 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CRAMP1Q96RY5 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CRAMP1Q96RY5 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
CRAMP1Q96RY5 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CRAMP1Q96RY5 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC21.41■■□□□ 1.02
CRAMP1Q96RY5 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
CRAMP1Q96RY5 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC21.41■■□□□ 1.02
CRAMP1Q96RY5 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC21.41■■□□□ 1.02
CRAMP1Q96RY5 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CRAMP1Q96RY5 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CRAMP1Q96RY5 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CRAMP1Q96RY5 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CRAMP1Q96RY5 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC21.41■■□□□ 1.02
CRAMP1Q96RY5 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.41■■□□□ 1.02
CRAMP1Q96RY5 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
CRAMP1Q96RY5 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CRAMP1Q96RY5 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CRAMP1Q96RY5 AC092919.2-201ENST00000623631 1645 ntBASIC21.4■■□□□ 1.02
CRAMP1Q96RY5 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CRAMP1Q96RY5 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CRAMP1Q96RY5 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CRAMP1Q96RY5 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC21.4■■□□□ 1.02
CRAMP1Q96RY5 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.4■■□□□ 1.02
CRAMP1Q96RY5 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC21.4■■□□□ 1.02
CRAMP1Q96RY5 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC21.4■■□□□ 1.02
CRAMP1Q96RY5 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CRAMP1Q96RY5 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
CRAMP1Q96RY5 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CRAMP1Q96RY5 NABP1-203ENST00000409510 843 ntTSL 5 BASIC21.4■■□□□ 1.02
CRAMP1Q96RY5 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC21.4■■□□□ 1.02
CRAMP1Q96RY5 WDR53-203ENST00000429115 683 ntTSL 2 BASIC21.4■■□□□ 1.02
CRAMP1Q96RY5 ADH5P3-201ENST00000433842 1137 ntBASIC21.4■■□□□ 1.02
CRAMP1Q96RY5 BCRP1-201ENST00000444246 691 ntBASIC21.4■■□□□ 1.02
CRAMP1Q96RY5 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC21.4■■□□□ 1.02
CRAMP1Q96RY5 AC109322.1-201ENST00000524499 1264 ntBASIC21.4■■□□□ 1.02
CRAMP1Q96RY5 DAD1-205ENST00000543337 501 ntTSL 3 BASIC21.4■■□□□ 1.02
CRAMP1Q96RY5 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CRAMP1Q96RY5 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC21.4■■□□□ 1.02
CRAMP1Q96RY5 AC093512.1-201ENST00000617969 520 ntBASIC21.4■■□□□ 1.02
CRAMP1Q96RY5 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.4■■□□□ 1.02
CRAMP1Q96RY5 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
CRAMP1Q96RY5 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC21.4■■□□□ 1.02
CRAMP1Q96RY5 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
CRAMP1Q96RY5 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CRAMP1Q96RY5 WIZP1-201ENST00000531444 2299 ntBASIC21.4■■□□□ 1.02
CRAMP1Q96RY5 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
CRAMP1Q96RY5 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CRAMP1Q96RY5 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms