Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC14.37□□□□□ -0.11
ZNF48Q96MX3 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF48Q96MX3 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF48Q96MX3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC14.37□□□□□ -0.11
ZNF48Q96MX3 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF48Q96MX3 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF48Q96MX3 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF48Q96MX3 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF48Q96MX3 PMS2P7-201ENST00000506558 1336 ntBASIC14.37□□□□□ -0.11
ZNF48Q96MX3 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
ZNF48Q96MX3 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF48Q96MX3 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF48Q96MX3 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF48Q96MX3 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
ZNF48Q96MX3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
ZNF48Q96MX3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
ZNF48Q96MX3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
ZNF48Q96MX3 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF48Q96MX3 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF48Q96MX3 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC14.36□□□□□ -0.11
ZNF48Q96MX3 AC135776.1-201ENST00000319817 2481 ntBASIC14.36□□□□□ -0.11
ZNF48Q96MX3 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF48Q96MX3 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF48Q96MX3 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
ZNF48Q96MX3 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF48Q96MX3 POR-209ENST00000439269 1858 ntTSL 2 BASIC14.36□□□□□ -0.11
ZNF48Q96MX3 GATB-213ENST00000515812 1893 ntTSL 5 BASIC14.36□□□□□ -0.11
ZNF48Q96MX3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF48Q96MX3 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.36□□□□□ -0.11
ZNF48Q96MX3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF48Q96MX3 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF48Q96MX3 AC104109.2-201ENST00000602919 1418 ntBASIC14.36□□□□□ -0.11
ZNF48Q96MX3 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC14.36□□□□□ -0.11
ZNF48Q96MX3 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
ZNF48Q96MX3 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF48Q96MX3 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF48Q96MX3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.36□□□□□ -0.11
ZNF48Q96MX3 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF48Q96MX3 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
ZNF48Q96MX3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.36□□□□□ -0.11
ZNF48Q96MX3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.36□□□□□ -0.11
ZNF48Q96MX3 AC098831.1-202ENST00000438821 336 ntBASIC14.36□□□□□ -0.11
ZNF48Q96MX3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF48Q96MX3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF48Q96MX3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
ZNF48Q96MX3 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.36□□□□□ -0.11
ZNF48Q96MX3 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.36□□□□□ -0.11
ZNF48Q96MX3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF48Q96MX3 AL139288.1-201ENST00000623748 933 ntBASIC14.36□□□□□ -0.11
ZNF48Q96MX3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF48Q96MX3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF48Q96MX3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF48Q96MX3 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF48Q96MX3 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF48Q96MX3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF48Q96MX3 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.36□□□□□ -0.11
ZNF48Q96MX3 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
ZNF48Q96MX3 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
ZNF48Q96MX3 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
ZNF48Q96MX3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC14.35□□□□□ -0.11
ZNF48Q96MX3 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 HLA-J-201ENST00000462773 1622 ntBASIC14.35□□□□□ -0.11
ZNF48Q96MX3 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 FAM220CP-201ENST00000395253 831 ntBASIC14.35□□□□□ -0.11
ZNF48Q96MX3 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 AC145285.3-201ENST00000564603 959 ntBASIC14.35□□□□□ -0.11
ZNF48Q96MX3 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 AP000867.4-201ENST00000641616 219 ntBASIC14.35□□□□□ -0.11
ZNF48Q96MX3 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms