Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CMTM3Q96MX0 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CMTM3Q96MX0 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.23■□□□□ 0.03
CMTM3Q96MX0 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CMTM3Q96MX0 PCDHA1-201ENST00000378133 2726 ntBASIC15.23■□□□□ 0.03
CMTM3Q96MX0 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CMTM3Q96MX0 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CMTM3Q96MX0 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CMTM3Q96MX0 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.22■□□□□ 0.03
CMTM3Q96MX0 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CMTM3Q96MX0 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CMTM3Q96MX0 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
CMTM3Q96MX0 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CMTM3Q96MX0 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CMTM3Q96MX0 ISG20-202ENST00000379224 540 ntTSL 3 BASIC15.22■□□□□ 0.03
CMTM3Q96MX0 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC15.22■□□□□ 0.03
CMTM3Q96MX0 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CMTM3Q96MX0 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CMTM3Q96MX0 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.22■□□□□ 0.03
CMTM3Q96MX0 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.22■□□□□ 0.03
CMTM3Q96MX0 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.22■□□□□ 0.03
CMTM3Q96MX0 AC233263.1-201ENST00000578059 224 ntBASIC15.22■□□□□ 0.03
CMTM3Q96MX0 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC15.22■□□□□ 0.03
CMTM3Q96MX0 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CMTM3Q96MX0 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.22■□□□□ 0.03
CMTM3Q96MX0 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.22■□□□□ 0.03
CMTM3Q96MX0 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CMTM3Q96MX0 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.22■□□□□ 0.03
CMTM3Q96MX0 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CMTM3Q96MX0 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CMTM3Q96MX0 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CMTM3Q96MX0 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC15.22■□□□□ 0.03
CMTM3Q96MX0 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CMTM3Q96MX0 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.22■□□□□ 0.03
CMTM3Q96MX0 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CMTM3Q96MX0 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.22■□□□□ 0.03
CMTM3Q96MX0 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CMTM3Q96MX0 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.22■□□□□ 0.03
CMTM3Q96MX0 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CMTM3Q96MX0 BX276092.7-203ENST00000637198 1536 ntBASIC15.22■□□□□ 0.03
CMTM3Q96MX0 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CMTM3Q96MX0 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CMTM3Q96MX0 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.22■□□□□ 0.03
CMTM3Q96MX0 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.22■□□□□ 0.03
CMTM3Q96MX0 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CMTM3Q96MX0 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 MAP2K4P1-201ENST00000438453 1195 ntBASIC15.21■□□□□ 0.03
CMTM3Q96MX0 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 GAMT-205ENST00000640762 751 ntTSL 5 BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 AC046185.3-201ENST00000623228 1824 ntBASIC15.21■□□□□ 0.03
CMTM3Q96MX0 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CMTM3Q96MX0 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms