Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDCA5Q96FF9 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDCA5Q96FF9 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDCA5Q96FF9 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
CDCA5Q96FF9 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC20.52■□□□□ 0.88
CDCA5Q96FF9 TSPY16P-201ENST00000449843 468 ntBASIC20.52■□□□□ 0.88
CDCA5Q96FF9 SPDYE11-202ENST00000450699 704 ntBASIC20.52■□□□□ 0.88
CDCA5Q96FF9 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDCA5Q96FF9 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC20.52■□□□□ 0.88
CDCA5Q96FF9 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC20.52■□□□□ 0.88
CDCA5Q96FF9 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDCA5Q96FF9 SPDYE9P-201ENST00000570642 692 ntBASIC20.52■□□□□ 0.88
CDCA5Q96FF9 YTHDF3-AS1-201ENST00000603538 718 ntBASIC20.52■□□□□ 0.88
CDCA5Q96FF9 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC20.52■□□□□ 0.88
CDCA5Q96FF9 SPDYE10P-202ENST00000612005 668 ntBASIC20.52■□□□□ 0.88
CDCA5Q96FF9 SPDYE8P-202ENST00000612377 668 ntBASIC20.52■□□□□ 0.88
CDCA5Q96FF9 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CDCA5Q96FF9 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.52■□□□□ 0.88
CDCA5Q96FF9 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDCA5Q96FF9 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDCA5Q96FF9 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.52■□□□□ 0.88
CDCA5Q96FF9 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.52■□□□□ 0.88
CDCA5Q96FF9 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.87
CDCA5Q96FF9 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CDCA5Q96FF9 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.52■□□□□ 0.87
CDCA5Q96FF9 BSG-215ENST00000618006 1329 ntTSL 2 BASIC20.52■□□□□ 0.87
CDCA5Q96FF9 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CDCA5Q96FF9 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDCA5Q96FF9 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.51■□□□□ 0.87
CDCA5Q96FF9 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.51■□□□□ 0.87
CDCA5Q96FF9 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CDCA5Q96FF9 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDCA5Q96FF9 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDCA5Q96FF9 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDCA5Q96FF9 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDCA5Q96FF9 MIR943-201ENST00000401286 94 ntBASIC20.51■□□□□ 0.87
CDCA5Q96FF9 UGT1A2P-201ENST00000454886 866 ntBASIC20.51■□□□□ 0.87
CDCA5Q96FF9 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CDCA5Q96FF9 AC069335.1-201ENST00000489972 472 ntBASIC20.51■□□□□ 0.87
CDCA5Q96FF9 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC20.51■□□□□ 0.87
CDCA5Q96FF9 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC20.51■□□□□ 0.87
CDCA5Q96FF9 RPL28-209ENST00000560055 670 ntTSL 3 BASIC20.51■□□□□ 0.87
CDCA5Q96FF9 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDCA5Q96FF9 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDCA5Q96FF9 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDCA5Q96FF9 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.51■□□□□ 0.87
CDCA5Q96FF9 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.51■□□□□ 0.87
CDCA5Q96FF9 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.51■□□□□ 0.87
CDCA5Q96FF9 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.51■□□□□ 0.87
CDCA5Q96FF9 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDCA5Q96FF9 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDCA5Q96FF9 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDCA5Q96FF9 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDCA5Q96FF9 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDCA5Q96FF9 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.5■□□□□ 0.87
CDCA5Q96FF9 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC20.5■□□□□ 0.87
CDCA5Q96FF9 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC20.5■□□□□ 0.87
CDCA5Q96FF9 CENPM-205ENST00000404067 905 ntTSL 3 BASIC20.5■□□□□ 0.87
CDCA5Q96FF9 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC20.5■□□□□ 0.87
CDCA5Q96FF9 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC20.5■□□□□ 0.87
CDCA5Q96FF9 ACTG1P4-201ENST00000425123 1122 ntBASIC20.5■□□□□ 0.87
CDCA5Q96FF9 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC20.5■□□□□ 0.87
CDCA5Q96FF9 AL592309.1-201ENST00000443127 649 ntBASIC20.5■□□□□ 0.87
CDCA5Q96FF9 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC20.5■□□□□ 0.87
CDCA5Q96FF9 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC20.5■□□□□ 0.87
CDCA5Q96FF9 FAM86C2P-203ENST00000528684 1004 ntBASIC20.5■□□□□ 0.87
CDCA5Q96FF9 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC20.5■□□□□ 0.87
CDCA5Q96FF9 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC20.5■□□□□ 0.87
CDCA5Q96FF9 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC20.5■□□□□ 0.87
CDCA5Q96FF9 AC116407.2-201ENST00000613639 860 ntBASIC20.5■□□□□ 0.87
CDCA5Q96FF9 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDCA5Q96FF9 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
CDCA5Q96FF9 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDCA5Q96FF9 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.5■□□□□ 0.87
CDCA5Q96FF9 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDCA5Q96FF9 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDCA5Q96FF9 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC20.5■□□□□ 0.87
CDCA5Q96FF9 AC009949.1-201ENST00000623048 1830 ntBASIC20.5■□□□□ 0.87
CDCA5Q96FF9 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDCA5Q96FF9 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDCA5Q96FF9 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20.5■□□□□ 0.87
CDCA5Q96FF9 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.5■□□□□ 0.87
CDCA5Q96FF9 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CDCA5Q96FF9 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDCA5Q96FF9 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDCA5Q96FF9 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CDCA5Q96FF9 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.49■□□□□ 0.87
CDCA5Q96FF9 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDCA5Q96FF9 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDCA5Q96FF9 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDCA5Q96FF9 TFAMP1-201ENST00000412727 736 ntBASIC20.49■□□□□ 0.87
CDCA5Q96FF9 KRT18P32-201ENST00000424695 1287 ntBASIC20.49■□□□□ 0.87
CDCA5Q96FF9 FAM58DP-201ENST00000428076 619 ntBASIC20.49■□□□□ 0.87
CDCA5Q96FF9 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC20.49■□□□□ 0.87
CDCA5Q96FF9 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.49■□□□□ 0.87
CDCA5Q96FF9 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC20.49■□□□□ 0.87
CDCA5Q96FF9 AL512356.2-201ENST00000546955 174 ntBASIC20.49■□□□□ 0.87
CDCA5Q96FF9 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDCA5Q96FF9 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC20.49■□□□□ 0.87
CDCA5Q96FF9 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms