Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC21.01■□□□□ 0.95
DDX11Q96FC9 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
DDX11Q96FC9 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX11Q96FC9 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC21.01■□□□□ 0.95
DDX11Q96FC9 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
DDX11Q96FC9 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC21■□□□□ 0.95
DDX11Q96FC9 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DDX11Q96FC9 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
DDX11Q96FC9 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DDX11Q96FC9 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
DDX11Q96FC9 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC21■□□□□ 0.95
DDX11Q96FC9 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC21■□□□□ 0.95
DDX11Q96FC9 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC21■□□□□ 0.95
DDX11Q96FC9 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DDX11Q96FC9 DFFB-203ENST00000341385 572 ntTSL 5 BASIC21■□□□□ 0.95
DDX11Q96FC9 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
DDX11Q96FC9 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
DDX11Q96FC9 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC21■□□□□ 0.95
DDX11Q96FC9 DUTP2-201ENST00000519164 463 ntBASIC21■□□□□ 0.95
DDX11Q96FC9 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC21■□□□□ 0.95
DDX11Q96FC9 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
DDX11Q96FC9 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC21■□□□□ 0.95
DDX11Q96FC9 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC21■□□□□ 0.95
DDX11Q96FC9 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC21■□□□□ 0.95
DDX11Q96FC9 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC21■□□□□ 0.95
DDX11Q96FC9 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC21■□□□□ 0.95
DDX11Q96FC9 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
DDX11Q96FC9 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
DDX11Q96FC9 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC21■□□□□ 0.95
DDX11Q96FC9 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
DDX11Q96FC9 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC21■□□□□ 0.95
DDX11Q96FC9 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
DDX11Q96FC9 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
DDX11Q96FC9 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
DDX11Q96FC9 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC21■□□□□ 0.95
DDX11Q96FC9 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DDX11Q96FC9 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DDX11Q96FC9 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
DDX11Q96FC9 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX11Q96FC9 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
DDX11Q96FC9 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
DDX11Q96FC9 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX11Q96FC9 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX11Q96FC9 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX11Q96FC9 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX11Q96FC9 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX11Q96FC9 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
DDX11Q96FC9 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX11Q96FC9 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.99■□□□□ 0.95
DDX11Q96FC9 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
DDX11Q96FC9 IGHV3-47-201ENST00000425060 335 ntBASIC20.99■□□□□ 0.95
DDX11Q96FC9 AC079781.3-201ENST00000449110 356 ntBASIC20.99■□□□□ 0.95
DDX11Q96FC9 AC011840.4-201ENST00000578471 627 ntBASIC20.99■□□□□ 0.95
DDX11Q96FC9 AC104692.2-201ENST00000603054 253 ntBASIC20.99■□□□□ 0.95
DDX11Q96FC9 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.99■□□□□ 0.95
DDX11Q96FC9 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.99■□□□□ 0.95
DDX11Q96FC9 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.99■□□□□ 0.95
DDX11Q96FC9 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX11Q96FC9 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
DDX11Q96FC9 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.99■□□□□ 0.95
DDX11Q96FC9 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX11Q96FC9 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.99■□□□□ 0.95
DDX11Q96FC9 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.99■□□□□ 0.95
DDX11Q96FC9 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX11Q96FC9 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX11Q96FC9 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX11Q96FC9 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC20.99■□□□□ 0.95
DDX11Q96FC9 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX11Q96FC9 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
DDX11Q96FC9 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DDX11Q96FC9 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DDX11Q96FC9 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
DDX11Q96FC9 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.98■□□□□ 0.95
DDX11Q96FC9 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DDX11Q96FC9 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DDX11Q96FC9 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DDX11Q96FC9 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DDX11Q96FC9 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
DDX11Q96FC9 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
DDX11Q96FC9 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.98■□□□□ 0.95
DDX11Q96FC9 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DDX11Q96FC9 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
DDX11Q96FC9 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
DDX11Q96FC9 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.97■□□□□ 0.95
DDX11Q96FC9 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.97■□□□□ 0.95
DDX11Q96FC9 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.97■□□□□ 0.95
DDX11Q96FC9 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DDX11Q96FC9 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DDX11Q96FC9 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
DDX11Q96FC9 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.97■□□□□ 0.95
DDX11Q96FC9 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DDX11Q96FC9 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.97■□□□□ 0.95
DDX11Q96FC9 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
DDX11Q96FC9 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DDX11Q96FC9 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.97■□□□□ 0.95
DDX11Q96FC9 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.97■□□□□ 0.95
DDX11Q96FC9 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
DDX11Q96FC9 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.97■□□□□ 0.95
DDX11Q96FC9 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.97■□□□□ 0.95
DDX11Q96FC9 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms